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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/cuCdUpdateParameters_8hpp.html below:

NCBI C++ ToolKit: include/algo/structure/cd_utils/cuCdUpdateParameters.hpp File Reference

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enum   BlastType { eBLAST , ePSI_BLAST , eBlastTypeEnd }   enum   BlastDatabase {
  eNR , eSwissprot , ePdb , ePat ,
  eYeast , eEcoli , eDrosophila_genome , eMonth ,
  eSmartblast_landmark , eNrV4 , ePdbV5 , eCddUpdate ,
  eBlastDatabaseEnd
}   enum   Organism {
  eAll_organisms , eCellular , eViruses , eArchaea ,
  eBacteria , eEukaryota , eViridiplantae , eFungi ,
  eMetazoa , eArthropoda , eVertebrata , eMammalia ,
  eRodentia , ePrimates , eOrganismEnd
}   enum   EnvironmentalTax { eUnclassified , eEnvironmental_samples , eEnvironmental_sequence , eEnvironmentalTaxEnd }   ◆ BlastDatabase Enumerator eNR  eSwissprot  ePdb  ePat  eYeast  eEcoli  eDrosophila_genome  eMonth  eSmartblast_landmark  eNrV4  ePdbV5  eCddUpdate  eBlastDatabaseEnd 

Definition at line 52 of file cuCdUpdateParameters.hpp.

◆ BlastType ◆ EnvironmentalTax Enumerator eUnclassified  eEnvironmental_samples  eEnvironmental_sequence  eEnvironmentalTaxEnd 

Definition at line 92 of file cuCdUpdateParameters.hpp.

◆ Organism Enumerator eAll_organisms  eCellular  eViruses  eArchaea  eBacteria  eEukaryota  eViridiplantae  eFungi  eMetazoa  eArthropoda  eVertebrata  eMammalia  eRodentia  ePrimates  eOrganismEnd 

Definition at line 71 of file cuCdUpdateParameters.hpp.

◆ BlastDatabaseNames ◆ BlastTypeNames ◆ EnvironmentalTaxNames string EnvironmentalTaxNames[] extern ◆ OrganismNames

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