Home - News ( United States | United Kingdom | Italy | Germany ) - Football scores

Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/cross__panel__ir_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/widgets/aln_crossaln/cross_panel_ir.cpp Source File

gl.

(GL_SRC_ALPHA, GL_ONE_MINUS_SRC_ALPHA);

gl.

(GL_LINE_SMOOTH);

gl.

(GL_LINE_SMOOTH_HINT, GL_NICEST);

gl.

(GL_POLYGON_SMOOTH);

gl.

(GL_POLYGON_SMOOTH_HINT, GL_NICEST);

gl.

(GL_POLYGON_SMOOTH);

& first_elem = elems.front().GetHitElem();

& last_elem = elems.back().GetHitElem();

( (to1 < rcv1_clip.

() && from2 > rcv2_clip.

()) ||

(from1 > rcv1_clip.

() && to2 < rcv2_clip.

()) ) {

(from1 == -1 || from2 == -1) {

( (to1 < rcv1_clip.

() && from2 > rcv2_clip.

()) ||

(from1 > rcv1_clip.

() && to2 < rcv2_clip.

()) ) {

objs.reserve(aligns.

());

(TGlyphs, it_G, glyphs) {

(std::find(sel_aligns.begin(), sel_aligns.end(), align)

!= sel_aligns.end()) {

gl.

(0.0f, 0.0f, 0.0f);

(seq_fit1 &&

->GetQueryHandle()) {

(

bp = 0; bp != seq1.length(); bp++) {

(seq_fit2 &&

->GetSubjectHandle()) {

(

bp = 0; bp != seq2.length(); bp++) {

(seq_fit1 && seq_fit2 &&

->GetQueryHandle() &&

->GetSubjectHandle()) {

& first_elem = elems.front().GetHitElem();

& last_elem = elems.back().GetHitElem();

( (to1 < rcv1_clip.

() && from2 > rcv2_clip.

()) ||

(from1 > rcv1_clip.

() && to2 < rcv2_clip.

()) ) {

(from1 == -1 || from2 == -1) {

( (to1 < rcv1_clip.

() && from2 > rcv2_clip.

()) ||

(from1 > rcv1_clip.

() && to2 < rcv2_clip.

()) ) {

gl.

(0.0f, 0.0f, 0.0f);

(seq1[bp] != seq2[bp] || (from1 + pos) % 10 == 0) {

(seq1[bp] != seq2[bp]) {

gl.

(1.0f, 0.0f, 0.0f, alpha);

gl.

(0.7f, 0.7f, 0.7f, alpha);

gl.

(GL_LINES);

gl.

(GL_LINES);

gl.

(GL_TRIANGLE_STRIP);

clip_bounds = 0;

clip_cross = 0;

elements_rendered = 0;

& first_elem = elems.front().GetHitElem();

& last_elem = elems.back().GetHitElem();

CHitGlyph::TElemGlyphCont::const_iterator itE = elems.begin();

CHitGlyph::TElemGlyphCont::const_iterator itE_end = elems.end();

range1.

(itE->GetHitElem().GetQueryStart() +

itE->GetHitElem().GetQueryLength());

range2.

(itE->GetHitElem().GetSubjectStart() +

itE->GetHitElem().GetSubjectLength());

( ; itE != itE_end; ++itE) {

range1 += elem_range1;

range2 += elem_range2;

x_to1 = x_elem1_stop;

x_to2 = x_elem2_stop;

& clr = itE->IsSelected() ? sel_color :

(is_mixed ? minus_color : plus_color);

x_elem2_start, x_elem2_stop);

range1 = elem_range1;

range2 = elem_range2;

x_from1 = x_elem1_start;

x_from2 = x_elem2_start;

x_to1 = x_elem1_stop;

x_to2 = x_elem2_stop;

x_from1, x_to1, x_from2, x_to2);

x_from1, x_to1, x_from2, x_to2);

Range = MaxV - MinV;

logRange =

(Range);

logRange = ceil(logRange) - 1;

Step = pow(10.0, logRange);

BaseStep = Step;

nTicks = Range / BaseStep;

nTicks = Range / BaseStep;

void SetObjectSelection(const vector< const objects::CSeq_align * > sel_aligns)

virtual ~CCrossPanelIR(void)

double x_SelectBaseStep(double MinV, double MaxV) const

void x_DrawCrossedPanel(CGlPane &pane, const CRgbaColor &color, TModelUnit x_from1, TModelUnit x_to1, TModelUnit x_from2, TModelUnit x_to2)

void GetObjectSelection(TConstObjects &objs) const

void x_DrawCrossAlignment(CGlPane &pane)

void x_GetSequence(const objects::CBioseq_Handle &handle, TSeqPos from, TSeqPos to, string &buffer) const

TModelUnit x_Seq2Lim1(TModelUnit seq)

void SetDataSource(ICrossAlnDataSource *ds)

void ResetObjectSelection()

CConstRef< objects::CObject_id > m_ColorScoreId

CIRef< ICrossAlnDataSource > m_DS

TModelUnit x_Lim2Seq2(TModelUnit lim)

void x_DrawSequence(CGlPane &pane)

TModelUnit x_Lim2Seq1(TModelUnit lim)

virtual void Render(CGlPane &pane)

bool x_IsSeqLettersFit1() const

void ColorByScore(CConstRef< objects::CObject_id > score_id)

CHitMatrixGraph::THitGlyphVector THitGlyphVector

TModelRect HitTest(CGlPane &pane, int x, int y, bool select=false)

CGlTextureFont m_Font_Fixed12

TModelUnit x_Seq2Lim2(TModelUnit seq)

bool x_IsSeqLettersFit2() const

void SetLimits(TVPRect rcm1, TModelRect rcv1, TVPRect rcm2, TModelRect rcv2)

CHitElemGlyph is a simple graphical object representing a Hit Element.

void SetSelected(bool b_set)

CHitGlyph is a simple graphical object representing a Hit as a set of corresponding Hit Elements.

const IHit & GetHit() const

vector< CHitElemGlyph > TElemGlyphCont

const TElemGlyphSet & GetSelectedGlyphs() const

void SelectGlyph(const CHitGlyph &glyph)

virtual void DeleteGlyphs()

const THitGlyphVector & GetGlyphs() const

virtual void CreateGlyph(const IHit &hit_elem)

vector< CHitGlyph * > THitGlyphVector

void ResetGlyphSelection()

class CRgbaColor provides a simple abstraction for managing colors.

virtual TSeqPos GetQueryLength() const =0

virtual const IHit & GetHit() const =0

virtual TSignedSeqPos GetQueryStart() const =0

virtual TSeqPos GetSubjectLength() const =0

virtual objects::ENa_strand GetSubjectStrand() const =0

virtual objects::ENa_strand GetQueryStrand() const =0

virtual TSignedSeqPos GetSubjectStart() const =0

IHitMatrixDataSource - abstract Data Source for Hit Matrix Widget.

virtual const THitAdapterCont & GetHits() const =0

vector< IHit * > THitAdapterCont

virtual const objects::CSeq_align * GetSeqAlign() const =0

iterator_bool insert(const value_type &val)

static const TModelUnit kSeqMapBarHeight

static const int sc_StepK[]

static const TModelUnit kClipMultiple

unsigned int TSeqPos

Type for sequence locations and lengths.

#define ITERATE(Type, Var, Cont)

ITERATE macro to sequence through container elements.

int TSignedSeqPos

Type for signed sequence position.

virtual void Enable(GLenum glstate)=0

virtual void Begin(GLenum mode)=0

Start rendering.

virtual void BlendFunc(GLenum sfactor, GLenum dfactor)=0

Options to be used when GL_BLEND is enabled.

void Color3f(GLfloat r, GLfloat g, GLfloat b)

IRender & GetGl()

convenience function for getting current render manager

void Vertex2d(GLdouble x, GLdouble y)

TVPRect & GetViewport(void)

TModelUnit UnProjectX(TVPUnit m_x) const

virtual void End()=0

Finish rendering (create buffer and send to renderer)

TModelUnit UnProjectHeight(TVPUnit vp_h) const

TModelUnit UnProjectY(TVPUnit m_y) const

void Color4f(GLfloat r, GLfloat g, GLfloat b, GLfloat a)

virtual TModelUnit TextHeight(void) const

virtual void TextOut(const char *text) const

TextOut interface Write the specified text and set up state and transformation as needed.

TModelRect & GetVisibleRect(void)

CGlRect< TModelUnit > TModelRect

virtual void Disable(GLenum glstate)=0

glDisable()

virtual void Hint(GLenum target, GLenum mode)=0

virtual void LineWidth(GLfloat w)=0

Set line width for drawing: glLineWidth()

TModelUnit GetScaleX(void) const

TModelUnit GetOffsetX() const

vector< CConstRef< CObject > > TConstObjects

CSeqVector GetSeqVector(EVectorCoding coding, ENa_strand strand=eNa_strand_plus) const

Get sequence: Iupacna or Iupacaa if use_iupac_coding is true.

@ eCoding_Iupac

Set coding to printable coding (Iupacna or Iupacaa)

void GetSeqData(TSeqPos start, TSeqPos stop, string &buffer) const

Fill the buffer string with the sequence data for the interval [start, stop).

void Reset(void)

Reset reference object.

position_type GetLength(void) const

bool IntersectingWith(const TThisType &r) const

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

void Start(void)

Start the timer.

TTo GetTo(void) const

Get the To member data.

TFrom GetFrom(void) const

Get the From member data.

void SetTo(TTo value)

Assign a value to To data member.

where boath are integers</td > n< td ></td > n</tr > n< tr > n< td > tse</td > n< td > optional</td > n< td > String</td > n< td class=\"description\"> TSE option controls what blob is orig

const GenericPointer< typename T::ValueType > T2 value

Defines: CTimeFormat - storage class for time format.

static const sljit_gpr r1

static const sljit_gpr r2

@ eIntersects

intersection found

EIntersectResult IntersectRayQuad(const CVect3< Data > &origin, const CVect3< Data > &dir, const CVect3< Data > &vert0, const CVect3< Data > &vert1, const CVect3< Data > &vert2, const CVect3< Data > &vert3, CVect3< Data > &intersect_pt, bool cull_test=false)

IntersectRayQuad() computes the intersection point of a ray collided with a quad.

RetroSearch is an open source project built by @garambo | Open a GitHub Issue

Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo

HTML: 3.2 | Encoding: UTF-8 | Version: 0.7.4