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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/convert__comment_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/packages/pkg_sequence_edit/convert_comment.cpp Source File

40 static void s_split

(

const string

&s,

string

delim, vector<string> &elems)

43  while

(start < s.length())

45  size_t

finish = s.find(delim,start);

46  if

(finish == string::npos) finish = s.length();

47  string

item = s.substr(start,finish-start);

49  if

(!item.empty()) elems.push_back(item);

50

start = finish+delim.length();

58  if

(comment.find(

"-START##"

) != string::npos && comment.find(

"-END##"

) != string::npos && comment.find(m_DelimiterNameValue) != string::npos)

61  size_t

e = comment.find(

"-START##"

);

62  size_t b

= comment.rfind(

"##"

,e);

63  if

(

b

== string::npos)

b

= 0;

64

e += strlen(

"-START##"

);

65

prefix = comment.substr(

b

,e-

b

);

68

e = comment.find(

"-END##"

);

69  b

= comment.rfind(

"##"

,e);

70  if

(

b

== string::npos)

b

= 0;

71

e += strlen(

"-END##"

);

72

suffix = comment.substr(

b

,e-

b

);

73

comment.erase(

b

,string::npos);

77

vector< pair<string,string> > fields;

78  s_split

(comment,m_DelimiterFields,lines);

79  for

(

unsigned int i

=0;

i

<lines.size(); ++

i

)

83  s_split

(lines[

i

],m_DelimiterNameValue,field);

84  if

(field.size() == 2)

85

fields.push_back(pair<string,string>(field[0],field[1]));

86  else if

(field.size() == 1)

90

fields.push_back(pair<string,string>(name,field[0]));

102

user.

SetType

().SetStr(

"StructuredComment"

);

104

user.

AddField

(

"StructuredCommentPrefix"

,prefix);

105  for

(

unsigned int i

=0;

i

<fields.size(); ++

i

)

106

user.

AddField

(fields[

i

].first,fields[

i

].second);

108

user.

AddField

(

"StructuredCommentSuffix"

,suffix);

113

e =

result

.find(

"-START##"

);

115  if

(

b

== string::npos)

b

= 0;

116

e =

result

.find(

"-END##"

);

117

e += strlen(

"-END##"

);

130  if

((*it)->IsComment())

133  string

modified = ApplyToComment((*it)->GetComment(),composite,seh);

134  if

(modified != (*it)->GetComment())

136  if

(modified.empty())

145

edited_object->

Assign

(**it);

159

ApplyToCSeq_entry (tse, **it, composite);

169

m_DelimiterNameValue = delim_name_value;

170

m_DelimiterFields = delim_fields;

172

ApplyToCSeq_entry (tse, *(tse.GetCompleteSeq_entry()), composite);

void AddCommand(IEditCommand &command)

Base class for all serializable objects.

CUser_object & AddField(const string &label, const string &value, EParseField parse=eParse_String)

add a data field to the user object that holds a given value

Undo/Redo interface for editing operations.

virtual void Execute(IEditCommand *command, wxWindow *window=0)=0

virtual void Assign(const CSerialObject &source, ESerialRecursionMode how=eRecursive)

Set object to copy of another one.

CSeq_entry_Handle GetSeq_entryHandle(CDataLoader *loader, const TBlobId &blob_id, EMissing action=eMissing_Default)

Get Seq-entry handle by its blob-id, with possible loading.

CScope & GetScope(void) const

Get scope this handle belongs to.

TObjectType * GetPointer(void) THROWS_NONE

Get pointer,.

void Reset(void)

Reset reference object.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

static void TruncateSpacesInPlace(string &str, ETrunc where=eTrunc_Both)

Truncate whitespace in a string (in-place)

static string & ReplaceInPlace(string &src, const string &search, const string &replace, SIZE_TYPE start_pos=0, SIZE_TYPE max_replace=0, SIZE_TYPE *num_replace=0)

Replace occurrences of a substring within a string.

void SetType(TType &value)

Assign a value to Type data member.

const TSet & GetSet(void) const

Get the variant data.

bool IsSet(void) const

Check if variant Set is selected.

TComment & SetComment(void)

Select the variant.

void Select(E_Choice index, EResetVariant reset=eDoResetVariant)

Select the requested variant if needed.

TUser & SetUser(void)

Select the variant.

@ e_User

user defined object

#define FOR_EACH_SEQENTRY_ON_SEQSET(Itr, Var)

FOR_EACH_SEQENTRY_ON_SEQSET EDIT_EACH_SEQENTRY_ON_SEQSET.

#define FOR_EACH_SEQDESC_ON_SEQENTRY(Itr, Var)

FOR_EACH_SEQDESC_ON_SEQENTRY EDIT_EACH_SEQDESC_ON_SEQENTRY.


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