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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/cmd__insert__bioseq__set_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/objutils/cmd_insert_bioseq_set.cpp Source File

: m_seh(seh), m_Class(new_class)

(

.IsSet()) {

num_in_set = 0;

(!

.GetSet().IsEmptySeq_set()) {

.TakeAllAnnots(new_set_edit);

.TakeAllDescr(new_set_edit);

(entry->

()) {

num_in_set = 0;

.ConvertSetToSeq();

(

= 0;

< num_in_set;

++) {

CCmdInsertBioseqSet(objects::CSeq_entry_Handle seh, const objects::CBioseq_set::TClass new_class)

objects::CBioseq_set::TClass m_Class

virtual void Execute()

Do the editing action.

void x_TransferSeqSet(objects::CSeq_entry_EditHandle dst, objects::CSeq_entry_EditHandle src, size_t num_in_set)

objects::CSeq_entry_Handle m_seh

virtual string GetLabel()

virtual void Unexecute()

Undo (opposite to Execute())

CSeq_entry_Handle GetSeq_entryHandle(CDataLoader *loader, const TBlobId &blob_id, EMissing action=eMissing_Default)

Get Seq-entry handle by its blob-id, with possible loading.

void Remove(void) const

Remove this Seq-entry from parent, or scope if it's top level Seq-entry.

void TakeAllAnnots(const CSeq_entry_EditHandle &src_entry) const

Remove all the annotation from seq-entry and attach to current one.

CConstRef< CBioseq_set > GetCompleteBioseq_set(void) const

Return the complete bioseq-set object.

CSeq_entry_EditHandle GetEditHandle(void) const

Get 'edit' version of handle.

CScope & GetScope(void) const

Get scope this handle belongs to.

CSeq_entry_EditHandle TakeEntry(const CSeq_entry_EditHandle &entry, int index=-1) const

Remove seq-entry from its location and attach to current one.

void TakeAllDescr(const CSeq_entry_EditHandle &src_entry) const

Remove all the descritions from seq-entry and attach to current one.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

TSet & SetSet(void)

Select the variant.

const TSet & GetSet(void) const

Get the variant data.

bool IsSetSeq_set(void) const

Check if a value has been assigned to Seq_set data member.

bool IsSet(void) const

Check if variant Set is selected.

const TSeq_set & GetSeq_set(void) const

Get the Seq_set member data.

void SetClass(TClass value)

Assign a value to Class data member.

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