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NCBI C++ ToolKit: src/algo/cobalt/clusterer.cpp File Reference
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USING_SCOPE (cobalt) static void s_CheckDistMatrix (const CClusterer::TDistMatrix &dmat) static void s_PurgeTrees (vector< TPhyTreeNode * > &trees) static double s_FindMaxDistFromElem (int elem, const CClusterer::TSingleCluster &cluster, const CClusterer::TDistMatrix &dmat) static double s_FindDistAsMax (const CClusterer::TSingleCluster &cluster1, const CClusterer::TSingleCluster &cluster2, const CClusterer::TDistMatrix &dmat) static double s_FindSumDistFromElem (int elem, const CClusterer::TSingleCluster &cluster, const CClusterer::TDistMatrix &dmat) Find sum of distances between given element and cluster elements. More...
static double s_FindDistAsMean (const CClusterer::TSingleCluster &cluster1, const CClusterer::TSingleCluster &cluster2, const CClusterer::TDistMatrix &dmat) Find mean distance between cluster elements. More...
static double s_FindMean (const vector< double > &vals) Find mean. More...
static double s_FindDist (const CClusterer::CSingleCluster &cluster, const CClusterer::CSingleCluster &included_cluster, const CClusterer::CSingleCluster &extended_cluster, const CClusterer::TDistMatrix &dmat, double current_dist, CClusterer::EDistMethod dist_method) Find distance between two clusters (cluster and included_cluster + extended_cluster) using given dist method. More...
TPhyTreeNode * s_CreateTreeLeaf (int id) ◆ s_CheckDistMatrix() ◆ s_CreateTreeLeaf() ◆ s_FindDist() ◆ s_FindDistAsMax() ◆ s_FindDistAsMean() ◆ s_FindMaxDistFromElem() ◆ s_FindMean() static double s_FindMean ( const vector< double > & vals ) static ◆ s_FindSumDistFromElem() ◆ s_PurgeTrees() ◆ USING_SCOPE() ◆ USING_NCBI_SCOPE
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