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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/clear__keywords_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/packages/pkg_sequence_edit/clear_keywords.cpp Source File

48 #include <wx/button.h> 49 #include <wx/statbox.h> 50 #include <wx/stattext.h> 84

wxWindowID

id

,

const

wxString& caption,

const

wxPoint& pos,

const

wxSize&

size

,

long

style )

88  Create

(parent,

id

, caption, pos,

size

, style);

96 bool CClearKeywords::Create

( wxWindow* parent, wxWindowID

id

,

const

wxString& caption,

const

wxPoint& pos,

const

wxSize&

size

,

long

style )

99 

SetExtraStyle(wxWS_EX_BLOCK_EVENTS);

100

wxDialog::Create( parent,

id

, caption, pos,

size

, style );

105

GetSizer()->SetSizeHints(

this

);

142

wxBoxSizer* itemBoxSizer2 =

new

wxBoxSizer(wxVERTICAL);

143

itemDialog1->SetSizer(itemBoxSizer2);

145

wxBoxSizer* itemBoxSizer3 =

new

wxBoxSizer(wxHORIZONTAL);

146

itemBoxSizer2->Add(itemBoxSizer3, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

148

wxStaticText* stattext2 =

new

wxStaticText( itemDialog1, wxID_STATIC,

_

(

"Remove Keyword"

), wxDefaultPosition, wxDefaultSize, 0 );

149

itemBoxSizer3->Add(stattext2, 0, wxALIGN_TOP|wxALL, 5);

150  m_Keyword

=

new

wxTextCtrl( itemDialog1,

wxID_ANY

, wxEmptyString, wxDefaultPosition, wxSize(100, -1), 0 );

151

itemBoxSizer3->Add(

m_Keyword

, 0, wxALIGN_TOP|wxLEFT|wxRIGHT|wxBOTTOM, 5);

152  m_AllKeywords

=

new

wxCheckBox(itemDialog1,

wxID_ANY

,

_

(

"All Keywords"

), wxDefaultPosition, wxDefaultSize, 0);

153

itemBoxSizer3->Add(

m_AllKeywords

, 0, wxALIGN_TOP | wxLEFT | wxRIGHT | wxBOTTOM, 5);

155

wxStaticBox* itemStaticBoxSizer3Static =

new

wxStaticBox(itemDialog1,

wxID_ANY

,

_

(

"Constraints"

));

156

wxStaticBoxSizer* itemStaticBoxSizer3 =

new

wxStaticBoxSizer(itemStaticBoxSizer3Static, wxVERTICAL);

157

itemBoxSizer2->Add(itemStaticBoxSizer3, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

159

wxBoxSizer* itemBoxSizer7 =

new

wxBoxSizer(wxHORIZONTAL);

160

itemStaticBoxSizer3->Add(itemBoxSizer7, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

162  m_Any

=

new

wxRadioButton( itemDialog1,

wxID_ANY

,

_

(

"Any sequence"

), wxDefaultPosition, wxDefaultSize, wxRB_GROUP );

163  m_Any

->SetValue(

true

);

164

itemBoxSizer7->Add(

m_Any

, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

166  m_Nuc

=

new

wxRadioButton( itemDialog1,

wxID_ANY

,

_

(

"Nucleotides"

), wxDefaultPosition, wxDefaultSize, 0 );

167  m_Nuc

->SetValue(

false

);

168

itemBoxSizer7->Add(

m_Nuc

, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

170  m_DNA

=

new

wxRadioButton( itemDialog1,

wxID_ANY

,

_

(

"DNA"

), wxDefaultPosition, wxDefaultSize, 0 );

171  m_DNA

->SetValue(

false

);

172

itemBoxSizer7->Add(

m_DNA

, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

174  m_RNA

=

new

wxRadioButton( itemDialog1,

wxID_ANY

,

_

(

"RNA"

), wxDefaultPosition, wxDefaultSize, 0 );

175  m_RNA

->SetValue(

false

);

176

itemBoxSizer7->Add(

m_RNA

, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

178  m_Proteins

=

new

wxRadioButton( itemDialog1,

wxID_ANY

,

_

(

"Proteins"

), wxDefaultPosition, wxDefaultSize, 0 );

180

itemBoxSizer7->Add(

m_Proteins

, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

182

wxArrayString choices;

188  if

(biosource_it->GetSource().IsSetGenome())

191

str_choices.

insert

(line);

197

choices.Add(wxString(*str_it));

200

wxBoxSizer* itemBoxSizer9 =

new

wxBoxSizer(wxHORIZONTAL);

201

itemStaticBoxSizer3->Add(itemBoxSizer9, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

203

wxStaticText* itemStaticText12 =

new

wxStaticText( itemDialog1, wxID_STATIC,

_

(

"Where source location is "

), wxDefaultPosition, wxDefaultSize, 0 );

204

itemBoxSizer9->Add(itemStaticText12, 0, wxALIGN_TOP|wxALL, 5);

206  m_SourceLoc

=

new

wxListBox( itemDialog1,

wxID_ANY

, wxDefaultPosition, wxDefaultSize, choices, wxLB_SINGLE );

207

itemBoxSizer9->Add(

m_SourceLoc

, 0, wxALIGN_TOP|wxALL, 5);

209

wxBoxSizer* itemBoxSizer10 =

new

wxBoxSizer(wxHORIZONTAL);

210

itemStaticBoxSizer3->Add(itemBoxSizer10, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

212

wxStaticText* itemStaticText11 =

new

wxStaticText( itemDialog1, wxID_STATIC,

_

(

"Where Sequence ID"

), wxDefaultPosition, wxDefaultSize, 0 );

213

itemBoxSizer10->Add(itemStaticText11, 0, wxALIGN_TOP|wxALL, 5);

219

wxBoxSizer* itemBoxSizer12 =

new

wxBoxSizer(wxHORIZONTAL);

220

itemBoxSizer2->Add(itemBoxSizer12, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

222

wxButton* itemButton13 =

new

wxButton( itemDialog1, wxID_OK,

_

(

"Accept"

), wxDefaultPosition, wxDefaultSize, 0 );

223

itemBoxSizer12->Add(itemButton13, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

225

wxButton* itemButton14 =

new

wxButton( itemDialog1, wxID_CANCEL,

_

(

"Cancel"

), wxDefaultPosition, wxDefaultSize, 0 );

226

itemBoxSizer12->Add(itemButton14, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

267  bool

pass_genome =

true

;

269

pass_genome =

false

;

283  if

((*it)->IsSource() && (*it)->GetSource().IsSetGenome() && (*it)->GetSource().GetGenome() == organelle)

300  if

(

m_Any

->GetValue())

318  if

(constraint && se.

IsSeq

())

325  if

(constraint->DoesTextMatch(

label

))

337  if

((*it)->IsGenbank())

341

edited_object->

Assign

((*it)->GetGenbank());

346  if

(remove_all || *keyword ==

remove

)

EVT_CHECKBOX(ID_CADJUSTFEATURES_CHECKBOX, CAdjustFeaturesForGaps::OnKnownUnknownSelected) EVT_CHECKBOX(ID_CADJUSTFEATURES_CHECKBOX1

static string GetOrganelleByGenome(unsigned int genome)

static CBioSource::EGenome GetGenomeByOrganelle(const string &organelle, NStr::ECase use_case=NStr::eCase, bool starts_with=false)

void Init()

Initialises member variables.

wxIcon GetIconResource(const wxString &name)

Retrieves icon resources.

void OnAllKeywordsSelected(wxCommandEvent &event)

CRef< CCmdComposite > GetCommand()

CChangeUnindexedObjectCommand< objects::CGB_block > CChangeGenbankBlockCommand

~CClearKeywords()

Destructor.

static bool ShowToolTips()

Should we show tooltips?

CStringConstraintPanel * m_StringConstraintPanel

wxCheckBox * m_AllKeywords

void CreateControls()

Creates the controls and sizers.

CClearKeywords()

Constructors.

wxBitmap GetBitmapResource(const wxString &name)

Retrieves bitmap resources.

wxRadioButton * m_Proteins

bool Create(wxWindow *parent, wxWindowID id=wxID_ANY, const wxString &caption=_("Clear Keywords"), const wxPoint &pos=wxDefaultPosition, const wxSize &size=wxDefaultSize, long style=wxCAPTION|wxRESIZE_BORDER|wxSYSTEM_MENU|wxCLOSE_BOX|wxTAB_TRAVERSAL)

Creation.

objects::CSeq_entry_Handle m_TopSeqEntry

void ApplyToCSeq_entry(const CSeq_entry &se, CCmdComposite *composite, bool pass_genome)

void AddCommand(IEditCommand &command)

Base class for all serializable objects.

void SetStringSelection(const wxString &str)

CRef< edit::CStringConstraint > GetStringConstraint()

iterator_bool insert(const value_type &val)

const_iterator begin() const

const_iterator end() const

static void DLIST_NAME() remove(DLIST_LIST_TYPE *list, DLIST_TYPE *item)

virtual void Assign(const CSerialObject &source, ESerialRecursionMode how=eRecursive)

Set object to copy of another one.

@ eContent

Untagged human-readable accession or the like.

@ fIncludeGivenEntry

Include the top (given) entry.

@ fRecursive

Iterate recursively.

void Reset(void)

Reset reference object.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

static const char label[]

void ResetKeywords(void)

Reset Keywords data member.

const TKeywords & GetKeywords(void) const

Get the Keywords member data.

bool IsSetKeywords(void) const

Check if a value has been assigned to Keywords data member.

EGenome

biological context

const TSeq & GetSeq(void) const

Get the variant data.

const TSet & GetSet(void) const

Get the variant data.

bool IsSeq(void) const

Check if variant Seq is selected.

bool IsSet(void) const

Check if variant Set is selected.

const TInst & GetInst(void) const

Get the Inst member data.

bool IsSetMol(void) const

Check if a value has been assigned to Mol data member.

bool IsSetInst(void) const

the sequence data Check if a value has been assigned to Inst data member.

TMol GetMol(void) const

Get the Mol member data.

@ e_Source

source of materials, includes Org-ref

const struct ncbi::grid::netcache::search::fields::SIZE size

#define FOR_EACH_SEQID_ON_BIOSEQ(Itr, Var)

FOR_EACH_SEQID_ON_BIOSEQ EDIT_EACH_SEQID_ON_BIOSEQ.

#define ERASE_KEYWORD_ON_GENBANKBLOCK(Itr, Var)

ERASE_KEYWORD_ON_GENBANKBLOCK.

#define EDIT_EACH_KEYWORD_ON_GENBANKBLOCK(Itr, Var)

#define FOR_EACH_SEQENTRY_ON_SEQSET(Itr, Var)

FOR_EACH_SEQENTRY_ON_SEQSET EDIT_EACH_SEQENTRY_ON_SEQSET.

#define FOR_EACH_SEQDESC_ON_SEQENTRY(Itr, Var)

FOR_EACH_SEQDESC_ON_SEQENTRY EDIT_EACH_SEQDESC_ON_SEQENTRY.


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