Home - News ( United States | United Kingdom | Italy | Germany ) - Football scores

Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/classbm_1_1sparse__vector__serializer.html below:

NCBI C++ ToolKit: bm::sparse_vector_serializer< SV

Search Toolkit Book for bm::sparse_vector_serializer

Serialize sparse vector into a memory buffer(s) structure. More...

#include <util/bitset/bmsparsevec_serial.h>

Serialize sparse vector into a memory buffer(s) structure.

Serialization format:

| HEADER | BIT-VECTORS ... | REMAP_MATRIX

Header structure: ----------------- BYTE+BYTE: Magic-signature 'BM' or 'BC' (c-compressed) BYTE : Byte order ( 0 - Big Endian, 1 - Little Endian) { BYTE : Number of Bit-vector planes (total) (non-zero when < 255 planes) | BYTE: zero - flag of large plane matrix INT64: Nnmber of bit-vector planes } INT64: Vector size INT64: Offset of plane 0 from the header start (value 0 means plane is empty) INT64: Offset of plane 1 from ... INT32: reserved

Bit-vectors: ------------ Based on current bit-vector serialization

Remap Matrix: SubHeader | Matrix BLOB

sub-header: BYTE: 'R' (remapping) or 'N' (no remapping) N - means no other info is saved on the stream INT64: remap matrix size

Definition at line 190 of file bmsparsevec_serial.h.

serialize the remap matrix used for SV encoding

Definition at line 857 of file bmsparsevec_serial.h.

References BM_ASSERT, BMRESTRICT, cnt, bm::count_nz(), bm::bit_out< TEncoder >::gamma(), bm::encoder::memcpy(), bm::encoder::put_16(), bm::encoder::put_32(), bm::encoder::put_64(), bm::encoder::put_8(), r(), and row.

Serialize sparse vector into a memory buffer(s) structure.

Parameters

sv - sparse vector to serialize sv_layout - buffer structure to keep the result as defined in bm::serialization_flags

Definition at line 939 of file bmsparsevec_serial.h.

References bm::bit_out< TEncoder >::bic_encode_u32_cm(), BM_ASSERT, buf, bm::globals< T >::byte_order(), bm::sparse_vector_serial_layout< SV >::capacity(), bm::bit_out< TEncoder >::flush(), bm::sparse_vector_serial_layout< SV >::get_plane(), i, bm::id_max32, offset, bm::encoder::put_32(), bm::encoder::put_64(), bm::encoder::put_8(), bm::sparse_vector_serial_layout< SV >::reserve(), bm::sparse_vector_serial_layout< SV >::resize(), bm::sparse_vector_serial_layout< SV >::resize_slices(), bm::sparse_vector_serial_layout< SV >::set_plane(), bm::sparse_vector_serial_layout< SV >::shrink(), and bm::encoder::size().

Referenced by bm::file_save_svector(), CVcfHistogram::Save(), CDataFrame< MAX_SIZE >::Serialize(), CSeqDictionary< Alphabet >::Serialize(), NVcfUtil::SerializeColumn(), bm::sparse_vector_serialize(), TestCompressSparseVectorSerial(), TestSignedSparseVectorSerial(), TestSparseVectorSerial(), TestSparseVectorSerialization2(), TestStrSparseVector(), TestStrSparseVectorSerial(), and CVCFVariantsBase::x_SerializeData().

Enable external XOR serialization via external reference vectors (data frame ref.

vector). This method is useful when we serialize a group of related sparse vectors which benefits from the XOR referencial compression

Parameters

bv_ref_ptr - external reference vector if NULL - resets the use of reference vector

Definition at line 808 of file bmsparsevec_serial.h.

References bool.

The documentation for this class was generated from the following files:

• include/util/bitset/bmfwd.h
• include/util/bitset/bmsparsevec_serial.h

RetroSearch is an open source project built by @garambo | Open a GitHub Issue

Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo

HTML: 3.2 | Encoding: UTF-8 | Version: 0.7.4