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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/classSAlignmentFile.html below:

NCBI C++ ToolKit: SAlignmentFile Struct Reference

Search Toolkit Book for SAlignmentFile

#include <objtools/readers/alnread.hpp>

Definition at line 132 of file alnread.hpp.

◆ TLineInfo ◆ NumDeflines() size_t SAlignmentFile::NumDeflines ( ) const inline ◆ NumSequences() size_t SAlignmentFile::NumSequences ( ) const inline ◆ align_format_found char SAlignmentFile::align_format_found ◆ deflines char** SAlignmentFile::deflines ◆ ids char** SAlignmentFile::ids ◆ mDeflines ◆ mIds ◆ mSequences vector<string> SAlignmentFile::mSequences ◆ num_deflines int SAlignmentFile::num_deflines ◆ num_organisms int SAlignmentFile::num_organisms ◆ num_segments int SAlignmentFile::num_segments ◆ num_sequences int SAlignmentFile::num_sequences ◆ organisms char** SAlignmentFile::organisms ◆ sequences char** SAlignmentFile::sequences

The documentation for this struct was generated from the following files:

include/objtools/readers/alnread.hpp
include/util/creaders/alnread.h

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