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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/classMasterSlaveAlignment.html below:

NCBI C++ ToolKit: MasterSlaveAlignment Class Reference

Search Toolkit Book for MasterSlaveAlignment

#include <objtools/cddalignview/cav_alignset.hpp>

Definition at line 75 of file cav_alignset.hpp.

◆ ResidueVector [1/2] ◆ ResidueVector [2/2] ◆ anonymous enum ◆ MasterSlaveAlignment() [1/2] ◆ MasterSlaveAlignment() [2/2]

Definition at line 202 of file su_alignment_set.cpp.

References CSeq_id::AsFastaString(), ERROR_MESSAGE, eUnaligned, CDense_diag_Base::GetDim(), CDense_seg_Base::GetDim(), CDense_diag_Base::GetIds(), CDense_seg_Base::GetIds(), CDense_diag_Base::GetLen(), CDense_seg_Base::GetLens(), CDense_seg_Base::GetNumseg(), CDense_diag_Base::GetStarts(), CDense_seg_Base::GetStarts(), i, CDense_seg_Base::IsSetDim(), le(), Sequence::Length(), m_blockStructure, m_master, m_masterToSlave, SequenceSet::m_sequences, m_slave, Sequence::MatchesSeqId(), and THROW_MESSAGE.

◆ Status() int MasterSlaveAlignment::Status ( void  ) const inline ◆ m_blockStructure ◆ m_master ◆ m_masterToSlave ◆ m_slave ◆ master ◆ masterToSlave ◆ slave ◆ status int MasterSlaveAlignment::status private

The documentation for this class was generated from the following files:

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