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NCBI C++ ToolKit: CTestSeqBasedMethod Class Reference
Search Toolkit Book for CTestSeqBasedMethod
CTestSeqBasedMethod. More...
#include <gui/widgets/aln_score/simple_methods.hpp>
CTestSeqBasedMethod () CTestSeqBasedMethod. More...
virtual IUITool * Clone () const void CreateColorTable () virtual string GetName () const returns unique name of the method that is used in UI to identify it More...
virtual string GetDescription () const returns a detailed description of the method that is used in UI More...
int GetType () const returns combination of EAlignType flags defining types of alignments that can be colored with this method More...
virtual bool IsAverageable () const return "true" if scores could be averaged More...
virtual int GetSupportedColorTypes () const returns a combination of EColorType flags More...
virtual void CalculateScores (IAlnExplorer::TNumrow row, const IScoringAlignment &aln, TScoreColl &scores) virtual const CRgbaColor & GetColorForScore (TScore score, EColorType type) const returns a color corresponding to a given score value. More...
virtual const CRgbaColor & GetColorForNoScore (IScoringMethod::EColorType type) const Call for display colors when CanCalculateScores returns false. More...
virtual void SetColorForNoScore (IScoringMethod::EColorType type, const CRgbaColor &color) CObject (void) Constructor. More...
CObject (const CObject &src) Copy constructor. More...
virtual ~CObject (void) Destructor. More...
CObject & operator= (const CObject &src) THROWS_NONE Assignment operator. More...
bool CanBeDeleted (void) const THROWS_NONE Check if object can be deleted. More...
bool IsAllocatedInPool (void) const THROWS_NONE Check if object is allocated in memory pool (not system heap) More...
bool Referenced (void) const THROWS_NONE Check if object is referenced. More...
bool ReferencedOnlyOnce (void) const THROWS_NONE Check if object is referenced only once. More...
void AddReference (void) const Add reference to object. More...
void RemoveReference (void) const Remove reference to object. More...
void ReleaseReference (void) const Remove reference without deleting object. More...
virtual void DoNotDeleteThisObject (void) Mark this object as not allocated in heap – do not delete this object. More...
virtual void DoDeleteThisObject (void) Mark this object as allocated in heap – object can be deleted. More...
void * operator new (size_t size) Define new operator for memory allocation. More...
void * operator new[] (size_t size) Define new[] operator for 'array' memory allocation. More...
void operator delete (void *ptr) Define delete operator for memory deallocation. More...
void operator delete[] (void *ptr) Define delete[] operator for memory deallocation. More...
void * operator new (size_t size, void *place) Define new operator. More...
void operator delete (void *ptr, void *place) Define delete operator. More...
void * operator new (size_t size, CObjectMemoryPool *place) Define new operator using memory pool. More...
void operator delete (void *ptr, CObjectMemoryPool *place) Define delete operator. More...
virtual void DebugDump (CDebugDumpContext ddc, unsigned int depth) const Define method for dumping debug information. More...
CDebugDumpable (void) virtual ~CDebugDumpable (void) void DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const void DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const void DumpToConsole (void) const virtual ~IScoringMethod () virtual ~IUITool () virtual ~IRowScoringMethod () ◆ CTestSeqBasedMethod() CTestSeqBasedMethod::CTestSeqBasedMethod ( ) ◆ CalculateScores()
Implements IRowScoringMethod.
Definition at line 686 of file simple_methods.cpp.
References buf, IScoringAlignment::GetAlnSeqString(), IScoringAlignment::GetAlnStart(), IScoringAlignment::GetAlnStop(), CRange_Base::GetFrom(), COpenRange< Position >::GetLength(), i, CAttrRangeCollection< Attr, Position >::push_back(), row, and CAttrRangeCollection< Attr, Position >::SetFrom().
◆ Clone() IUITool * CTestSeqBasedMethod::Clone ( void ) const virtual ◆ CreateColorTable() void CTestSeqBasedMethod::CreateColorTable ( ) ◆ GetColorForNoScore() ◆ GetColorForScore() ◆ GetDescription() string CTestSeqBasedMethod::GetDescription ( ) const virtual ◆ GetName() string CTestSeqBasedMethod::GetName ( ) const virtual ◆ GetSupportedColorTypes() int CTestSeqBasedMethod::GetSupportedColorTypes ( ) const virtual ◆ GetType() int CTestSeqBasedMethod::GetType ( ) const virtual ◆ IsAverageable() bool CTestSeqBasedMethod::IsAverageable ( ) const virtual ◆ SetColorForNoScore() ◆ m_NoScoreColor ◆ m_vColors
The documentation for this class was generated from the following files:
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