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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/classCSrcTableColumnBase.html below:

NCBI C++ ToolKit: CSrcTableColumnBase Class Reference

Search Toolkit Book for CSrcTableColumnBase

#include <gui/packages/pkg_sequence_edit/srcedit_util.hpp>

virtual bool AddToBioSource (objects::CBioSource &in_out_bioSource, const string &newValue, objects::edit::EExistingText existing_text) virtual void ClearInBioSource (objects::CBioSource &in_out_bioSource) virtual string GetFromBioSource (const objects::CBioSource &in_out_bioSource) const =0 virtual vector< string > GetValsFromBioSource (const objects::CBioSource &src) const virtual string GetLabel () const virtual vector< string > IsValid (const vector< string > &values) virtual void SetConstraint (const string &field_name, CConstRef< edit::CStringConstraint > string_constraint) virtual bool AllowMultipleValues () vector< CRef< objects::edit::CApplyObject > > GetApplyObjects (CBioseq_Handle bsh) vector< CConstRef< CObject > > GetObjects (CBioseq_Handle bsh) string GetVal (const CObject &object) vector< string > GetVals (const CObject &object) void ClearVal (CObject &object) void SetSourceType (ESourceType type) virtual void AddToBioSource (objects::CBioSource &in_out_bioSource, const string &newValue) virtual void ClearInBioSource (objects::CBioSource &in_out_bioSource) virtual string GetFromBioSource (const objects::CBioSource &in_out_bioSource) const virtual string GetLabel () const CObject (void) Constructor. More...
CObject (const CObject &src) Copy constructor. More...
virtual ~CObject (void) Destructor. More...
CObject & operator= (const CObject &src) THROWS_NONE Assignment operator. More...
bool CanBeDeleted (void) const THROWS_NONE Check if object can be deleted. More...
bool IsAllocatedInPool (void) const THROWS_NONE Check if object is allocated in memory pool (not system heap) More...
bool Referenced (void) const THROWS_NONE Check if object is referenced. More...
bool ReferencedOnlyOnce (void) const THROWS_NONE Check if object is referenced only once. More...
void AddReference (void) const Add reference to object. More...
void RemoveReference (void) const Remove reference to object. More...
void ReleaseReference (void) const Remove reference without deleting object. More...
virtual void DoNotDeleteThisObject (void) Mark this object as not allocated in heap – do not delete this object. More...
virtual void DoDeleteThisObject (void) Mark this object as allocated in heap – object can be deleted. More...
void * operator new (size_t size) Define new operator for memory allocation. More...
void * operator new[] (size_t size) Define new[] operator for 'array' memory allocation. More...
void operator delete (void *ptr) Define delete operator for memory deallocation. More...
void operator delete[] (void *ptr) Define delete[] operator for memory deallocation. More...
void * operator new (size_t size, void *place) Define new operator. More...
void operator delete (void *ptr, void *place) Define delete operator. More...
void * operator new (size_t size, CObjectMemoryPool *place) Define new operator using memory pool. More...
void operator delete (void *ptr, CObjectMemoryPool *place) Define delete operator. More...
virtual void DebugDump (CDebugDumpContext ddc, unsigned int depth) const Define method for dumping debug information. More...
CDebugDumpable (void) virtual ~CDebugDumpable (void) void DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const void DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const void DumpToConsole (void) const

Definition at line 222 of file srcedit_util.hpp.

◆ ESourceType ◆ AddToBioSource() [1/2] virtual void CSrcTableColumnBase::AddToBioSource ( objects::CBioSource & in_out_bioSource, const string & newValue ) inlinevirtual ◆ AddToBioSource() [2/2] ◆ AllowMultipleValues() virtual bool CSrcTableColumnBase::AllowMultipleValues ( ) inlinevirtual ◆ ClearInBioSource() [1/2] virtual void CSrcTableColumnBase::ClearInBioSource ( objects::CBioSource & in_out_bioSource ) inlinevirtual

Reimplemented in CSrcTablePrimerColumn, CSrcTableRevPrimerNameColumn, CSrcTableFwdPrimerNameColumn, CSrcTableRevPrimerSeqColumn, CSrcTableFwdPrimerSeqColumn, CSrcTableOrgModColumn, CSrcTableSubSourceColumn, CSrcTableGenomeColumn, CSrcTableTaxonIdColumn, CSrcTableOrganismNameColumn, CSrcTableAllPrimersColumn, CSrcStructuredVoucherPartColumn, CSrcTableOrgModColumn, CSrcTableSubSourceColumn, CSrcTableAllNotesColumn, CSrcTableDbxrefColumn, CSrcTableTaxonIdColumn, CSrcTableOriginColumn, CSrcTableGenomeColumn, CSrcTaxnameAfterBinomialColumn, and CSrcTableOrganismNameColumn.

Definition at line 232 of file srcedit_util.hpp.

Referenced by CSrcTableAllNotesColumn::ClearInBioSource(), and ClearVal().

◆ ClearInBioSource() [2/2] virtual void CSrcTableColumnBase::ClearInBioSource ( objects::CBioSource & in_out_bioSource ) inlinevirtual

Definition at line 65 of file src_table_column.hpp.

◆ ClearVal() void CSrcTableColumnBase::ClearVal ( CObject & object ) ◆ GetApplyObjects() ◆ GetFromBioSource() [1/2] virtual string CSrcTableColumnBase::GetFromBioSource ( const objects::CBioSource & in_out_bioSource ) const inlinevirtual

Reimplemented in CSrcTableAllPrimersColumn, CSrcTablePrimerColumn, CSrcTableRevPrimerNameColumn, CSrcTableFwdPrimerNameColumn, CSrcTableRevPrimerSeqColumn, CSrcTableFwdPrimerSeqColumn, CSrcTableOrgModColumn, CSrcTableSubSourceColumn, CSrcTableGenomeColumn, CSrcTableTaxonIdColumn, CSrcTableOrganismNameColumn, CSrcStructuredVoucherPartColumn, CSrcTableOrgModColumn, CSrcTableSubSourceColumn, CSrcTableAllNotesColumn, CSrcTableTaxonIdColumn, CSrcTableOriginColumn, CSrcTableGenomeColumn, CSrcTaxnameAfterBinomialColumn, CSrcTableOrganismNameColumn, CSrcTableDbxrefColumn, CSrcTableDivisionColumn, CSrcTableLineageColumn, and CSrcTableCommonNameColumn.

Definition at line 67 of file src_table_column.hpp.

◆ GetFromBioSource() [2/2] virtual string CSrcTableColumnBase::GetFromBioSource ( const objects::CBioSource & in_out_bioSource ) const pure virtual

Implemented in CSrcTableAllPrimersColumn, CSrcTablePrimerColumn, CSrcTableRevPrimerNameColumn, CSrcTableFwdPrimerNameColumn, CSrcTableRevPrimerSeqColumn, CSrcTableFwdPrimerSeqColumn, CSrcTableOrgModColumn, CSrcTableSubSourceColumn, CSrcTableGenomeColumn, CSrcTableTaxonIdColumn, CSrcTableOrganismNameColumn, CSrcStructuredVoucherPartColumn, CSrcTableOrgModColumn, CSrcTableSubSourceColumn, CSrcTableAllNotesColumn, CSrcTableTaxonIdColumn, CSrcTableOriginColumn, CSrcTableGenomeColumn, CSrcTaxnameAfterBinomialColumn, CSrcTableOrganismNameColumn, CSrcTableDbxrefColumn, CSrcTableDivisionColumn, CSrcTableLineageColumn, and CSrcTableCommonNameColumn.

Referenced by GetVal(), CSrcTableAllNotesColumn::GetValsFromBioSource(), and GetValsFromBioSource().

◆ GetLabel() [1/2] virtual string CSrcTableColumnBase::GetLabel ( void ) const inlinevirtual

Reimplemented in CSrcTableRevPrimerNameColumn, CSrcTableFwdPrimerNameColumn, CSrcTableRevPrimerSeqColumn, CSrcTableFwdPrimerSeqColumn, CSrcTableOrgModColumn, CSrcTableSubSourceColumn, CSrcTableGenomeColumn, CSrcTableTaxonIdColumn, CSrcTableOrganismNameColumn, CSrcTableRevPrimerNameColumn, CSrcTableFwdPrimerNameColumn, CSrcTableRevPrimerSeqColumn, CSrcTableFwdPrimerSeqColumn, CSrcStructuredVoucherPartColumn, CSrcTableOrgModColumn, CSrcTableSubSourceColumn, CSrcTableTaxonIdColumn, CSrcTableOriginColumn, CSrcTableGenomeColumn, CSrcTaxnameAfterBinomialColumn, and CSrcTableOrganismNameColumn.

Definition at line 235 of file srcedit_util.hpp.

◆ GetLabel() [2/2] virtual string CSrcTableColumnBase::GetLabel ( void ) const inlinevirtual

Definition at line 69 of file src_table_column.hpp.

◆ GetObjects() ◆ GetVal() ◆ GetVals() ◆ GetValsFromBioSource() vector< string > CSrcTableColumnBase::GetValsFromBioSource ( const objects::CBioSource & src ) const virtual ◆ IsValid() virtual vector<string> CSrcTableColumnBase::IsValid ( const vector< string > & values ) inlinevirtual ◆ SetConstraint() virtual void CSrcTableColumnBase::SetConstraint ( const string & field_name, CConstRef< edit::CStringConstraint > string_constraint ) inlinevirtual ◆ SetSourceType() void CSrcTableColumnBase::SetSourceType ( ESourceType type ) inline ◆ m_Type

The documentation for this class was generated from the following files:

include/gui/packages/pkg_sequence_edit/srcedit_util.hpp
src/app/biosample_chk/src_table_column.hpp
src/gui/packages/pkg_sequence_edit/srcedit_util.cpp

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