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NCBI C++ ToolKit: CSpliced_exon_chunk_Base Class Reference
Spliced-exon-chunk: piece of an exon lengths are given in nucleotide bases (1/3 of aminoacid when product is a protein) More...
CSpliced_exon_chunk_Base (void) virtual ~CSpliced_exon_chunk_Base (void) DECLARE_INTERNAL_TYPE_INFO () virtual void Reset (void) Reset the whole object. More...
virtual void ResetSelection (void) Reset the selection (set it to e_not_set). More...
E_Choice Which (void) const Which variant is currently selected. More...
void CheckSelected (E_Choice index) const Verify selection, throw exception if it differs from the expected. More...
void ThrowInvalidSelection (E_Choice index) const Throw 'InvalidSelection' exception. More...
void Select (E_Choice index, EResetVariant reset=eDoResetVariant) Select the requested variant if needed. More...
void Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool) Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool IsMatch (void) const Check if variant Match is selected. More...
TMatch GetMatch (void) const Get the variant data. More...
TMatch & SetMatch (void) Select the variant. More...
void SetMatch (TMatch value) Select the variant and set its data. More...
bool IsMismatch (void) const Check if variant Mismatch is selected. More...
TMismatch GetMismatch (void) const Get the variant data. More...
TMismatch & SetMismatch (void) Select the variant. More...
void SetMismatch (TMismatch value) Select the variant and set its data. More...
bool IsDiag (void) const Check if variant Diag is selected. More...
TDiag GetDiag (void) const Get the variant data. More...
TDiag & SetDiag (void) Select the variant. More...
void SetDiag (TDiag value) Select the variant and set its data. More...
bool IsProduct_ins (void) const Check if variant Product_ins is selected. More...
TProduct_ins GetProduct_ins (void) const Get the variant data. More...
TProduct_ins & SetProduct_ins (void) Select the variant. More...
void SetProduct_ins (TProduct_ins value) Select the variant and set its data. More...
bool IsGenomic_ins (void) const Check if variant Genomic_ins is selected. More...
TGenomic_ins GetGenomic_ins (void) const Get the variant data. More...
TGenomic_ins & SetGenomic_ins (void) Select the variant. More...
void SetGenomic_ins (TGenomic_ins value) Select the variant and set its data. More...
CSerialObject (void) virtual ~CSerialObject (void) virtual const CTypeInfo * GetThisTypeInfo (void) const =0 virtual void Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive) Set object to copy of another one. More...
virtual bool Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const Check if both objects contain the same values. More...
virtual void DebugDump (CDebugDumpContext ddc, unsigned int depth) const Define method for dumping debug information. More...
void ThrowUnassigned (TMemberIndex index) const void ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const bool HasNamespaceName (void) const Check if object data type has namespace name. More...
const string & GetNamespaceName (void) const Get namespace name. More...
bool HasNamespacePrefix (void) const Check if data type has namespace prefix. More...
const string & GetNamespacePrefix (void) const Get namespace prefix. More...
CObject (void) Constructor. More...
CObject (const CObject &src) Copy constructor. More...
virtual ~CObject (void) Destructor. More...
CObject & operator= (const CObject &src) THROWS_NONE Assignment operator. More...
bool CanBeDeleted (void) const THROWS_NONE Check if object can be deleted. More...
bool IsAllocatedInPool (void) const THROWS_NONE Check if object is allocated in memory pool (not system heap) More...
bool Referenced (void) const THROWS_NONE Check if object is referenced. More...
bool ReferencedOnlyOnce (void) const THROWS_NONE Check if object is referenced only once. More...
void AddReference (void) const Add reference to object. More...
void RemoveReference (void) const Remove reference to object. More...
void ReleaseReference (void) const Remove reference without deleting object. More...
virtual void DoNotDeleteThisObject (void) Mark this object as not allocated in heap – do not delete this object. More...
virtual void DoDeleteThisObject (void) Mark this object as allocated in heap – object can be deleted. More...
void * operator new (size_t size) Define new operator for memory allocation. More...
void * operator new[] (size_t size) Define new[] operator for 'array' memory allocation. More...
void operator delete (void *ptr) Define delete operator for memory deallocation. More...
void operator delete[] (void *ptr) Define delete[] operator for memory deallocation. More...
void * operator new (size_t size, void *place) Define new operator. More...
void operator delete (void *ptr, void *place) Define delete operator. More...
void * operator new (size_t size, CObjectMemoryPool *place) Define new operator using memory pool. More...
void operator delete (void *ptr, CObjectMemoryPool *place) Define delete operator. More...
CDebugDumpable (void) virtual ~CDebugDumpable (void) void DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const void DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const void DumpToConsole (void) const
Spliced-exon-chunk: piece of an exon lengths are given in nucleotide bases (1/3 of aminoacid when product is a protein)
CSpliced_exon_chunk_Base –
Definition at line 71 of file Spliced_exon_chunk_.hpp.
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