Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/classCSparse__align__Base.html below:
NCBI C++ ToolKit: CSparse_align_Base Class Reference
CSparse_align_Base (void) virtual ~CSparse_align_Base (void) DECLARE_INTERNAL_TYPE_INFO () bool IsSetFirst_id (void) const Check if a value has been assigned to First_id data member. More...
bool CanGetFirst_id (void) const Check if it is safe to call GetFirst_id method. More...
void ResetFirst_id (void) Reset First_id data member. More...
const TFirst_id & GetFirst_id (void) const Get the First_id member data. More...
void SetFirst_id (TFirst_id &value) Assign a value to First_id data member. More...
TFirst_id & SetFirst_id (void) Assign a value to First_id data member. More...
bool IsSetSecond_id (void) const Check if a value has been assigned to Second_id data member. More...
bool CanGetSecond_id (void) const Check if it is safe to call GetSecond_id method. More...
void ResetSecond_id (void) Reset Second_id data member. More...
const TSecond_id & GetSecond_id (void) const Get the Second_id member data. More...
void SetSecond_id (TSecond_id &value) Assign a value to Second_id data member. More...
TSecond_id & SetSecond_id (void) Assign a value to Second_id data member. More...
bool IsSetNumseg (void) const number of segments Check if a value has been assigned to Numseg data member. More...
bool CanGetNumseg (void) const Check if it is safe to call GetNumseg method. More...
void ResetNumseg (void) Reset Numseg data member. More...
TNumseg GetNumseg (void) const Get the Numseg member data. More...
void SetNumseg (TNumseg value) Assign a value to Numseg data member. More...
TNumseg & SetNumseg (void) Assign a value to Numseg data member. More...
bool IsSetFirst_starts (void) const starts on the first sequence [numseg] Check if a value has been assigned to First_starts data member. More...
bool CanGetFirst_starts (void) const Check if it is safe to call GetFirst_starts method. More...
void ResetFirst_starts (void) Reset First_starts data member. More...
const TFirst_starts & GetFirst_starts (void) const Get the First_starts member data. More...
TFirst_starts & SetFirst_starts (void) Assign a value to First_starts data member. More...
bool IsSetSecond_starts (void) const starts on the second sequence [numseg] Check if a value has been assigned to Second_starts data member. More...
bool CanGetSecond_starts (void) const Check if it is safe to call GetSecond_starts method. More...
void ResetSecond_starts (void) Reset Second_starts data member. More...
const TSecond_starts & GetSecond_starts (void) const Get the Second_starts member data. More...
TSecond_starts & SetSecond_starts (void) Assign a value to Second_starts data member. More...
bool IsSetLens (void) const lengths of segments [numseg] Check if a value has been assigned to Lens data member. More...
bool CanGetLens (void) const Check if it is safe to call GetLens method. More...
void ResetLens (void) Reset Lens data member. More...
const TLens & GetLens (void) const Get the Lens member data. More...
TLens & SetLens (void) Assign a value to Lens data member. More...
bool IsSetSecond_strands (void) const Check if a value has been assigned to Second_strands data member. More...
bool CanGetSecond_strands (void) const Check if it is safe to call GetSecond_strands method. More...
void ResetSecond_strands (void) Reset Second_strands data member. More...
const TSecond_strands & GetSecond_strands (void) const Get the Second_strands member data. More...
TSecond_strands & SetSecond_strands (void) Assign a value to Second_strands data member. More...
bool IsSetSeg_scores (void) const per-segment scores Check if a value has been assigned to Seg_scores data member. More...
bool CanGetSeg_scores (void) const Check if it is safe to call GetSeg_scores method. More...
void ResetSeg_scores (void) Reset Seg_scores data member. More...
const TSeg_scores & GetSeg_scores (void) const Get the Seg_scores member data. More...
TSeg_scores & SetSeg_scores (void) Assign a value to Seg_scores data member. More...
virtual void Reset (void) Reset the whole object. More...
CSerialObject (void) virtual ~CSerialObject (void) virtual const CTypeInfo * GetThisTypeInfo (void) const =0 virtual void Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive) Set object to copy of another one. More...
virtual bool Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const Check if both objects contain the same values. More...
virtual void DebugDump (CDebugDumpContext ddc, unsigned int depth) const Define method for dumping debug information. More...
void ThrowUnassigned (TMemberIndex index) const void ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const bool HasNamespaceName (void) const Check if object data type has namespace name. More...
const string & GetNamespaceName (void) const Get namespace name. More...
bool HasNamespacePrefix (void) const Check if data type has namespace prefix. More...
const string & GetNamespacePrefix (void) const Get namespace prefix. More...
CObject (void) Constructor. More...
CObject (const CObject &src) Copy constructor. More...
virtual ~CObject (void) Destructor. More...
CObject & operator= (const CObject &src) THROWS_NONE Assignment operator. More...
bool CanBeDeleted (void) const THROWS_NONE Check if object can be deleted. More...
bool IsAllocatedInPool (void) const THROWS_NONE Check if object is allocated in memory pool (not system heap) More...
bool Referenced (void) const THROWS_NONE Check if object is referenced. More...
bool ReferencedOnlyOnce (void) const THROWS_NONE Check if object is referenced only once. More...
void AddReference (void) const Add reference to object. More...
void RemoveReference (void) const Remove reference to object. More...
void ReleaseReference (void) const Remove reference without deleting object. More...
virtual void DoNotDeleteThisObject (void) Mark this object as not allocated in heap – do not delete this object. More...
virtual void DoDeleteThisObject (void) Mark this object as allocated in heap – object can be deleted. More...
void * operator new (size_t size) Define new operator for memory allocation. More...
void * operator new[] (size_t size) Define new[] operator for 'array' memory allocation. More...
void operator delete (void *ptr) Define delete operator for memory deallocation. More...
void operator delete[] (void *ptr) Define delete[] operator for memory deallocation. More...
void * operator new (size_t size, void *place) Define new operator. More...
void operator delete (void *ptr, void *place) Define delete operator. More...
void * operator new (size_t size, CObjectMemoryPool *place) Define new operator using memory pool. More...
void operator delete (void *ptr, CObjectMemoryPool *place) Define delete operator. More...
CDebugDumpable (void) virtual ~CDebugDumpable (void) void DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const void DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const void DumpToConsole (void) const
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