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NCBI C++ ToolKit: CSeq_id_Local_Tree Class Reference
Search Toolkit Book for CSeq_id_Local_Tree
#include "seq_id_tree.hpp"
(Private to src/objects/seq.)
CSeq_id_Local_Tree (CSeq_id_Mapper *mapper) ~CSeq_id_Local_Tree (void) virtual bool Empty (void) const virtual CSeq_id_Handle FindInfo (const CSeq_id &id) const virtual CSeq_id_Handle FindOrCreate (const CSeq_id &id) virtual bool HaveMatch (const CSeq_id_Handle &id) const virtual void FindMatch (const CSeq_id_Handle &id, TSeq_id_MatchList &id_list) const virtual void FindMatchStr (const string &sid, TSeq_id_MatchList &id_list) const virtual size_t Dump (CNcbiOstream &out, CSeq_id::E_Choice type, int details) const CSeq_id_Which_Tree (CSeq_id_Mapper *mapper) virtual ~CSeq_id_Which_Tree (void) virtual CSeq_id_Handle GetGiHandle (TGi gi) virtual void DropInfo (const CSeq_id_Info *info) virtual bool Match (const CSeq_id_Handle &h1, const CSeq_id_Handle &h2) const virtual bool IsBetterVersion (const CSeq_id_Handle &h1, const CSeq_id_Handle &h2) const virtual bool HaveReverseMatch (const CSeq_id_Handle &id) const virtual void FindReverseMatch (const CSeq_id_Handle &id, TSeq_id_MatchList &id_list) CObject (void) Constructor. More...
CObject (const CObject &src) Copy constructor. More...
virtual ~CObject (void) Destructor. More...
CObject & operator= (const CObject &src) THROWS_NONE Assignment operator. More...
bool CanBeDeleted (void) const THROWS_NONE Check if object can be deleted. More...
bool IsAllocatedInPool (void) const THROWS_NONE Check if object is allocated in memory pool (not system heap) More...
bool Referenced (void) const THROWS_NONE Check if object is referenced. More...
bool ReferencedOnlyOnce (void) const THROWS_NONE Check if object is referenced only once. More...
void AddReference (void) const Add reference to object. More...
void RemoveReference (void) const Remove reference to object. More...
void ReleaseReference (void) const Remove reference without deleting object. More...
virtual void DoNotDeleteThisObject (void) Mark this object as not allocated in heap – do not delete this object. More...
virtual void DoDeleteThisObject (void) Mark this object as allocated in heap – object can be deleted. More...
void * operator new (size_t size) Define new operator for memory allocation. More...
void * operator new[] (size_t size) Define new[] operator for 'array' memory allocation. More...
void operator delete (void *ptr) Define delete operator for memory deallocation. More...
void operator delete[] (void *ptr) Define delete[] operator for memory deallocation. More...
void * operator new (size_t size, void *place) Define new operator. More...
void operator delete (void *ptr, void *place) Define delete operator. More...
void * operator new (size_t size, CObjectMemoryPool *place) Define new operator using memory pool. More...
void operator delete (void *ptr, CObjectMemoryPool *place) Define delete operator. More...
virtual void DebugDump (CDebugDumpContext ddc, unsigned int depth) const Define method for dumping debug information. More...
CDebugDumpable (void) virtual ~CDebugDumpable (void) void DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const void DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const void DumpToConsole (void) const
Definition at line 739 of file seq_id_tree.hpp.
◆ TById ◆ TByStr ◆ CSeq_id_Local_Tree() ◆ ~CSeq_id_Local_Tree() CSeq_id_Local_Tree::~CSeq_id_Local_Tree ( void )
Definition at line 1823 of file seq_id_tree.cpp.
◆ Dump()
Implements CSeq_id_Which_Tree.
Definition at line 2080 of file seq_id_tree.cpp.
References CSeq_id_Mapper::eDumpAllIds, CSeq_id_Mapper::eDumpStatistics, int, ITERATE, kMallocOverhead, m_ById, m_ByStr, out(), CSeq_id_Base::SelectionName(), ncbi::grid::netcache::search::fields::size, map_checker< Container >::size(), string, and sx_StringMemory().
◆ Empty() bool CSeq_id_Local_Tree::Empty ( void ) const virtual ◆ FindInfo() ◆ FindMatch() ◆ FindMatchStr() ◆ FindOrCreate() ◆ HaveMatch() ◆ x_FindIdInfo() ◆ x_FindInfo() ◆ x_FindStrInfo() ◆ x_Unindex()
Implements CSeq_id_Which_Tree.
Definition at line 2014 of file seq_id_tree.cpp.
References _ASSERT, _VERIFY, map_checker< Container >::erase(), CObject_id_Base::GetId(), CObject_id_Base::GetStr(), info, CObject_id_Base::IsId(), CSeq_id_Base::IsLocal(), CObject_id_Base::IsStr(), m_ById, and m_ByStr.
◆ m_ById TById CSeq_id_Local_Tree::m_ById private ◆ m_ByStr TByStr CSeq_id_Local_Tree::m_ByStr private
The documentation for this class was generated from the following files:
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