Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/classCPIR__block__Base.html below:
NCBI C++ ToolKit: CPIR_block_Base Class Reference
enum class E_memberIndex {
e__allMandatory = 0 , e_had_punct , e_host , e_source ,
e_summary , e_genetic , e_includes , e_placement ,
e_superfamily , e_keywords , e_cross_reference , e_date ,
e_seq_raw , e_seqref
} typedef bool THad_punct typedef string THost typedef string TSource typedef string TSummary typedef string TGenetic typedef string TIncludes typedef string TPlacement typedef string TSuperfamily typedef list< string > TKeywords typedef string TCross_reference typedef string TDate typedef string TSeq_raw typedef list< CRef< CSeq_id > > TSeqref typedef Tparent::CMemberIndex< E_memberIndex, 14 > TmemberIndex enum EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern } Control filling of newly allocated memory. More...
typedef CObjectCounterLocker TLockerType Default locker type for CRef. More...
typedef atomic< Uint8 > TCounter Counter type is CAtomiCounter. More...
typedef Uint8 TCount Alias for value type of counter. More...
CPIR_block_Base (void) virtual ~CPIR_block_Base (void) DECLARE_INTERNAL_TYPE_INFO () bool IsSetHad_punct (void) const had punctuation in sequence ? Check if a value has been assigned to Had_punct data member. More...
bool CanGetHad_punct (void) const Check if it is safe to call GetHad_punct method. More...
void ResetHad_punct (void) Reset Had_punct data member. More...
THad_punct GetHad_punct (void) const Get the Had_punct member data. More...
void SetHad_punct (THad_punct value) Assign a value to Had_punct data member. More...
THad_punct & SetHad_punct (void) Assign a value to Had_punct data member. More...
bool IsSetHost (void) const Check if a value has been assigned to Host data member. More...
bool CanGetHost (void) const Check if it is safe to call GetHost method. More...
void ResetHost (void) Reset Host data member. More...
const THost & GetHost (void) const Get the Host member data. More...
void SetHost (const THost &value) Assign a value to Host data member. More...
void SetHost (THost &&value) THost & SetHost (void) Assign a value to Host data member. More...
bool IsSetSource (void) const source line Check if a value has been assigned to Source data member. More...
bool CanGetSource (void) const Check if it is safe to call GetSource method. More...
void ResetSource (void) Reset Source data member. More...
const TSource & GetSource (void) const Get the Source member data. More...
void SetSource (const TSource &value) Assign a value to Source data member. More...
void SetSource (TSource &&value) TSource & SetSource (void) Assign a value to Source data member. More...
bool IsSetSummary (void) const Check if a value has been assigned to Summary data member. More...
bool CanGetSummary (void) const Check if it is safe to call GetSummary method. More...
void ResetSummary (void) Reset Summary data member. More...
const TSummary & GetSummary (void) const Get the Summary member data. More...
void SetSummary (const TSummary &value) Assign a value to Summary data member. More...
void SetSummary (TSummary &&value) TSummary & SetSummary (void) Assign a value to Summary data member. More...
bool IsSetGenetic (void) const Check if a value has been assigned to Genetic data member. More...
bool CanGetGenetic (void) const Check if it is safe to call GetGenetic method. More...
void ResetGenetic (void) Reset Genetic data member. More...
const TGenetic & GetGenetic (void) const Get the Genetic member data. More...
void SetGenetic (const TGenetic &value) Assign a value to Genetic data member. More...
void SetGenetic (TGenetic &&value) TGenetic & SetGenetic (void) Assign a value to Genetic data member. More...
bool IsSetIncludes (void) const Check if a value has been assigned to Includes data member. More...
bool CanGetIncludes (void) const Check if it is safe to call GetIncludes method. More...
void ResetIncludes (void) Reset Includes data member. More...
const TIncludes & GetIncludes (void) const Get the Includes member data. More...
void SetIncludes (const TIncludes &value) Assign a value to Includes data member. More...
void SetIncludes (TIncludes &&value) TIncludes & SetIncludes (void) Assign a value to Includes data member. More...
bool IsSetPlacement (void) const Check if a value has been assigned to Placement data member. More...
bool CanGetPlacement (void) const Check if it is safe to call GetPlacement method. More...
void ResetPlacement (void) Reset Placement data member. More...
const TPlacement & GetPlacement (void) const Get the Placement member data. More...
void SetPlacement (const TPlacement &value) Assign a value to Placement data member. More...
void SetPlacement (TPlacement &&value) TPlacement & SetPlacement (void) Assign a value to Placement data member. More...
bool IsSetSuperfamily (void) const Check if a value has been assigned to Superfamily data member. More...
bool CanGetSuperfamily (void) const Check if it is safe to call GetSuperfamily method. More...
void ResetSuperfamily (void) Reset Superfamily data member. More...
const TSuperfamily & GetSuperfamily (void) const Get the Superfamily member data. More...
void SetSuperfamily (const TSuperfamily &value) Assign a value to Superfamily data member. More...
void SetSuperfamily (TSuperfamily &&value) TSuperfamily & SetSuperfamily (void) Assign a value to Superfamily data member. More...
bool IsSetKeywords (void) const Check if a value has been assigned to Keywords data member. More...
bool CanGetKeywords (void) const Check if it is safe to call GetKeywords method. More...
void ResetKeywords (void) Reset Keywords data member. More...
const TKeywords & GetKeywords (void) const Get the Keywords member data. More...
TKeywords & SetKeywords (void) Assign a value to Keywords data member. More...
bool IsSetCross_reference (void) const Check if a value has been assigned to Cross_reference data member. More...
bool CanGetCross_reference (void) const Check if it is safe to call GetCross_reference method. More...
void ResetCross_reference (void) Reset Cross_reference data member. More...
const TCross_reference & GetCross_reference (void) const Get the Cross_reference member data. More...
void SetCross_reference (const TCross_reference &value) Assign a value to Cross_reference data member. More...
void SetCross_reference (TCross_reference &&value) TCross_reference & SetCross_reference (void) Assign a value to Cross_reference data member. More...
bool IsSetDate (void) const Check if a value has been assigned to Date data member. More...
bool CanGetDate (void) const Check if it is safe to call GetDate method. More...
void ResetDate (void) Reset Date data member. More...
const TDate & GetDate (void) const Get the Date member data. More...
void SetDate (const TDate &value) Assign a value to Date data member. More...
void SetDate (TDate &&value) TDate & SetDate (void) Assign a value to Date data member. More...
bool IsSetSeq_raw (void) const seq with punctuation Check if a value has been assigned to Seq_raw data member. More...
bool CanGetSeq_raw (void) const Check if it is safe to call GetSeq_raw method. More...
void ResetSeq_raw (void) Reset Seq_raw data member. More...
const TSeq_raw & GetSeq_raw (void) const Get the Seq_raw member data. More...
void SetSeq_raw (const TSeq_raw &value) Assign a value to Seq_raw data member. More...
void SetSeq_raw (TSeq_raw &&value) TSeq_raw & SetSeq_raw (void) Assign a value to Seq_raw data member. More...
bool IsSetSeqref (void) const xref to other sequences Check if a value has been assigned to Seqref data member. More...
bool CanGetSeqref (void) const Check if it is safe to call GetSeqref method. More...
void ResetSeqref (void) Reset Seqref data member. More...
const TSeqref & GetSeqref (void) const Get the Seqref member data. More...
TSeqref & SetSeqref (void) Assign a value to Seqref data member. More...
virtual void Reset (void) Reset the whole object. More...
CSerialObject (void) virtual ~CSerialObject (void) virtual const CTypeInfo * GetThisTypeInfo (void) const =0 virtual void Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive) Set object to copy of another one. More...
virtual bool Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const Check if both objects contain the same values. More...
virtual void DebugDump (CDebugDumpContext ddc, unsigned int depth) const Define method for dumping debug information. More...
void ThrowUnassigned (TMemberIndex index) const void ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const bool HasNamespaceName (void) const Check if object data type has namespace name. More...
const string & GetNamespaceName (void) const Get namespace name. More...
bool HasNamespacePrefix (void) const Check if data type has namespace prefix. More...
const string & GetNamespacePrefix (void) const Get namespace prefix. More...
CObject (void) Constructor. More...
CObject (const CObject &src) Copy constructor. More...
virtual ~CObject (void) Destructor. More...
CObject & operator= (const CObject &src) THROWS_NONE Assignment operator. More...
bool CanBeDeleted (void) const THROWS_NONE Check if object can be deleted. More...
bool IsAllocatedInPool (void) const THROWS_NONE Check if object is allocated in memory pool (not system heap) More...
bool Referenced (void) const THROWS_NONE Check if object is referenced. More...
bool ReferencedOnlyOnce (void) const THROWS_NONE Check if object is referenced only once. More...
void AddReference (void) const Add reference to object. More...
void RemoveReference (void) const Remove reference to object. More...
void ReleaseReference (void) const Remove reference without deleting object. More...
virtual void DoNotDeleteThisObject (void) Mark this object as not allocated in heap – do not delete this object. More...
virtual void DoDeleteThisObject (void) Mark this object as allocated in heap – object can be deleted. More...
void * operator new (size_t size) Define new operator for memory allocation. More...
void * operator new[] (size_t size) Define new[] operator for 'array' memory allocation. More...
void operator delete (void *ptr) Define delete operator for memory deallocation. More...
void operator delete[] (void *ptr) Define delete[] operator for memory deallocation. More...
void * operator new (size_t size, void *place) Define new operator. More...
void operator delete (void *ptr, void *place) Define delete operator. More...
void * operator new (size_t size, CObjectMemoryPool *place) Define new operator using memory pool. More...
void operator delete (void *ptr, CObjectMemoryPool *place) Define delete operator. More...
CDebugDumpable (void) virtual ~CDebugDumpable (void) void DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const void DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const void DumpToConsole (void) const
PIR specific descriptions.
CPIR_block_Base –
Definition at line 78 of file PIR_block_.hpp.
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