Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/classCMSIterativeSettings__Base.html below:
NCBI C++ ToolKit: CMSIterativeSettings_Base Class Reference
CMSIterativeSettings_Base (void) virtual ~CMSIterativeSettings_Base (void) DECLARE_INTERNAL_TYPE_INFO () bool IsSetResearchthresh (void) const e-val threshold for re-searching spectra, 0 = always re-search Check if a value has been assigned to Researchthresh data member. More...
bool CanGetResearchthresh (void) const Check if it is safe to call GetResearchthresh method. More...
void ResetResearchthresh (void) Reset Researchthresh data member. More...
TResearchthresh GetResearchthresh (void) const Get the Researchthresh member data. More...
void SetResearchthresh (TResearchthresh value) Assign a value to Researchthresh data member. More...
TResearchthresh & SetResearchthresh (void) Assign a value to Researchthresh data member. More...
bool IsSetSubsetthresh (void) const e-val threshold for picking sequence subset, 0 = all sequences Check if a value has been assigned to Subsetthresh data member. More...
bool CanGetSubsetthresh (void) const Check if it is safe to call GetSubsetthresh method. More...
void ResetSubsetthresh (void) Reset Subsetthresh data member. More...
TSubsetthresh GetSubsetthresh (void) const Get the Subsetthresh member data. More...
void SetSubsetthresh (TSubsetthresh value) Assign a value to Subsetthresh data member. More...
TSubsetthresh & SetSubsetthresh (void) Assign a value to Subsetthresh data member. More...
bool IsSetReplacethresh (void) const e-val threshold for replacing hitset, 0 = only if better Check if a value has been assigned to Replacethresh data member. More...
bool CanGetReplacethresh (void) const Check if it is safe to call GetReplacethresh method. More...
void ResetReplacethresh (void) Reset Replacethresh data member. More...
TReplacethresh GetReplacethresh (void) const Get the Replacethresh member data. More...
void SetReplacethresh (TReplacethresh value) Assign a value to Replacethresh data member. More...
TReplacethresh & SetReplacethresh (void) Assign a value to Replacethresh data member. More...
virtual void Reset (void) Reset the whole object. More...
CSerialObject (void) virtual ~CSerialObject (void) virtual const CTypeInfo * GetThisTypeInfo (void) const =0 virtual void Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive) Set object to copy of another one. More...
virtual bool Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const Check if both objects contain the same values. More...
virtual void DebugDump (CDebugDumpContext ddc, unsigned int depth) const Define method for dumping debug information. More...
void ThrowUnassigned (TMemberIndex index) const void ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const bool HasNamespaceName (void) const Check if object data type has namespace name. More...
const string & GetNamespaceName (void) const Get namespace name. More...
bool HasNamespacePrefix (void) const Check if data type has namespace prefix. More...
const string & GetNamespacePrefix (void) const Get namespace prefix. More...
CObject (void) Constructor. More...
CObject (const CObject &src) Copy constructor. More...
virtual ~CObject (void) Destructor. More...
CObject & operator= (const CObject &src) THROWS_NONE Assignment operator. More...
bool CanBeDeleted (void) const THROWS_NONE Check if object can be deleted. More...
bool IsAllocatedInPool (void) const THROWS_NONE Check if object is allocated in memory pool (not system heap) More...
bool Referenced (void) const THROWS_NONE Check if object is referenced. More...
bool ReferencedOnlyOnce (void) const THROWS_NONE Check if object is referenced only once. More...
void AddReference (void) const Add reference to object. More...
void RemoveReference (void) const Remove reference to object. More...
void ReleaseReference (void) const Remove reference without deleting object. More...
virtual void DoNotDeleteThisObject (void) Mark this object as not allocated in heap – do not delete this object. More...
virtual void DoDeleteThisObject (void) Mark this object as allocated in heap – object can be deleted. More...
void * operator new (size_t size) Define new operator for memory allocation. More...
void * operator new[] (size_t size) Define new[] operator for 'array' memory allocation. More...
void operator delete (void *ptr) Define delete operator for memory deallocation. More...
void operator delete[] (void *ptr) Define delete[] operator for memory deallocation. More...
void * operator new (size_t size, void *place) Define new operator. More...
void operator delete (void *ptr, void *place) Define delete operator. More...
void * operator new (size_t size, CObjectMemoryPool *place) Define new operator using memory pool. More...
void operator delete (void *ptr, CObjectMemoryPool *place) Define delete operator. More...
CDebugDumpable (void) virtual ~CDebugDumpable (void) void DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const void DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const void DumpToConsole (void) const
Iterative search settings.
CMSIterativeSettings_Base –
Definition at line 69 of file MSIterativeSettings_.hpp.
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