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NCBI C++ ToolKit: CINSDInterval_Base Class Reference
INSDInterval_iscomp is a boolean indicating whether an INSDInterval_from / INSDInterval_to location represents a location on the complement strand. More...
CINSDInterval_Base (void) virtual ~CINSDInterval_Base (void) DECLARE_INTERNAL_TYPE_INFO () bool IsSetFrom (void) const Check if a value has been assigned to From data member. More...
bool CanGetFrom (void) const Check if it is safe to call GetFrom method. More...
void ResetFrom (void) Reset From data member. More...
TFrom GetFrom (void) const Get the From member data. More...
void SetFrom (TFrom value) Assign a value to From data member. More...
TFrom & SetFrom (void) Assign a value to From data member. More...
bool IsSetTo (void) const Check if a value has been assigned to To data member. More...
bool CanGetTo (void) const Check if it is safe to call GetTo method. More...
void ResetTo (void) Reset To data member. More...
TTo GetTo (void) const Get the To member data. More...
void SetTo (TTo value) Assign a value to To data member. More...
TTo & SetTo (void) Assign a value to To data member. More...
bool IsSetPoint (void) const Check if a value has been assigned to Point data member. More...
bool CanGetPoint (void) const Check if it is safe to call GetPoint method. More...
void ResetPoint (void) Reset Point data member. More...
TPoint GetPoint (void) const Get the Point member data. More...
void SetPoint (TPoint value) Assign a value to Point data member. More...
TPoint & SetPoint (void) Assign a value to Point data member. More...
bool IsSetIscomp (void) const Check if a value has been assigned to Iscomp data member. More...
bool CanGetIscomp (void) const Check if it is safe to call GetIscomp method. More...
void ResetIscomp (void) Reset Iscomp data member. More...
TIscomp GetIscomp (void) const Get the Iscomp member data. More...
void SetIscomp (TIscomp value) Assign a value to Iscomp data member. More...
TIscomp & SetIscomp (void) Assign a value to Iscomp data member. More...
bool IsSetInterbp (void) const Check if a value has been assigned to Interbp data member. More...
bool CanGetInterbp (void) const Check if it is safe to call GetInterbp method. More...
void ResetInterbp (void) Reset Interbp data member. More...
TInterbp GetInterbp (void) const Get the Interbp member data. More...
void SetInterbp (TInterbp value) Assign a value to Interbp data member. More...
TInterbp & SetInterbp (void) Assign a value to Interbp data member. More...
bool IsSetAccession (void) const Check if a value has been assigned to Accession data member. More...
bool CanGetAccession (void) const Check if it is safe to call GetAccession method. More...
void ResetAccession (void) Reset Accession data member. More...
const TAccession & GetAccession (void) const Get the Accession member data. More...
void SetAccession (const TAccession &value) Assign a value to Accession data member. More...
void SetAccession (TAccession &&value) TAccession & SetAccession (void) Assign a value to Accession data member. More...
virtual void Reset (void) Reset the whole object. More...
CSerialObject (void) virtual ~CSerialObject (void) virtual const CTypeInfo * GetThisTypeInfo (void) const =0 virtual void Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive) Set object to copy of another one. More...
virtual bool Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const Check if both objects contain the same values. More...
virtual void DebugDump (CDebugDumpContext ddc, unsigned int depth) const Define method for dumping debug information. More...
void ThrowUnassigned (TMemberIndex index) const void ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const bool HasNamespaceName (void) const Check if object data type has namespace name. More...
const string & GetNamespaceName (void) const Get namespace name. More...
bool HasNamespacePrefix (void) const Check if data type has namespace prefix. More...
const string & GetNamespacePrefix (void) const Get namespace prefix. More...
CObject (void) Constructor. More...
CObject (const CObject &src) Copy constructor. More...
virtual ~CObject (void) Destructor. More...
CObject & operator= (const CObject &src) THROWS_NONE Assignment operator. More...
bool CanBeDeleted (void) const THROWS_NONE Check if object can be deleted. More...
bool IsAllocatedInPool (void) const THROWS_NONE Check if object is allocated in memory pool (not system heap) More...
bool Referenced (void) const THROWS_NONE Check if object is referenced. More...
bool ReferencedOnlyOnce (void) const THROWS_NONE Check if object is referenced only once. More...
void AddReference (void) const Add reference to object. More...
void RemoveReference (void) const Remove reference to object. More...
void ReleaseReference (void) const Remove reference without deleting object. More...
virtual void DoNotDeleteThisObject (void) Mark this object as not allocated in heap – do not delete this object. More...
virtual void DoDeleteThisObject (void) Mark this object as allocated in heap – object can be deleted. More...
void * operator new (size_t size) Define new operator for memory allocation. More...
void * operator new[] (size_t size) Define new[] operator for 'array' memory allocation. More...
void operator delete (void *ptr) Define delete operator for memory deallocation. More...
void operator delete[] (void *ptr) Define delete[] operator for memory deallocation. More...
void * operator new (size_t size, void *place) Define new operator. More...
void operator delete (void *ptr, void *place) Define delete operator. More...
void * operator new (size_t size, CObjectMemoryPool *place) Define new operator using memory pool. More...
void operator delete (void *ptr, CObjectMemoryPool *place) Define delete operator. More...
CDebugDumpable (void) virtual ~CDebugDumpable (void) void DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const void DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const void DumpToConsole (void) const
INSDInterval_iscomp is a boolean indicating whether an INSDInterval_from / INSDInterval_to location represents a location on the complement strand.
When INSDInterval_iscomp is TRUE, it essentially confirms that a 'from' value which is greater than a 'to' value is intentional, because the location is on the opposite strand of the presented sequence. INSDInterval_interbp is a boolean indicating whether a feature (such as a restriction site) is located between two adjacent basepairs. When INSDInterval_interbp is TRUE, the 'from' and 'to' values will differ by exactly one base for linear molecules. For circular molecules, if the inter-basepair position falls between the last and the first base, then 'from' will be the final base (equal to the length of the sequence), and 'to' will have a value of 1.
CINSDInterval_Base –
Definition at line 88 of file INSDInterval_.hpp.
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