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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/classCAlignDistGraph.html below:

NCBI C++ ToolKit: CAlignDistGraph Class Reference

Search Toolkit Book for CAlignDistGraph

Definition at line 908 of file merge_tree.cpp.

◆ TAlignEquivListMap ◆ TIndexDistMap ◆ TIndexIndexMap ◆ CAlignDistGraph() [1/2] ◆ CAlignDistGraph() [2/2] ◆ AddAlignment() ◆ CalculateAllDistances() void CAlignDistGraph::CalculateAllDistances ( ) inline ◆ Empty() bool CAlignDistGraph::Empty ( void  ) const inline ◆ GetAndRemoveNearestPair()

Definition at line 1030 of file merge_tree.cpp.

References AlignEquivMap, CD, map_checker< Container >::empty(), map_checker< Container >::erase(), map_checker< Container >::insert(), ITERATE, max(), NearestDistMap, NearestMap, map_checker< Container >::size(), and x_CalculateOneDistance().

Referenced by CTreeAlignMerger::x_Merge_Dist_Impl().

◆ GetLastAlignEquivs() ◆ Print() void CAlignDistGraph::Print ( void  ) ◆ RemoveEquivs()

Definition at line 1098 of file merge_tree.cpp.

References AlignEquivMap, map_checker< Container >::end(), map_checker< Container >::erase(), ERASE_ITERATE, map_checker< Container >::find(), map_checker< Container >::insert(), ITERATE, m_EquivRangeBuilder, max(), CEquivRangeBuilder::MergeAbuttings(), NearestDistMap, NearestMap, CEquivRangeBuilder::SplitIntersections(), and x_CalculateOneDistance().

Referenced by CTreeAlignMerger::x_Merge_Dist_Impl().

◆ Size() size_t CAlignDistGraph::Size ( void  ) const inline ◆ x_CalculateAllDistances() void CAlignDistGraph::x_CalculateAllDistances ( ) private ◆ x_CalculateOneDistance() void CAlignDistGraph::x_CalculateOneDistance ( size_t  CalcIndex ) private ◆ AlignEquivMap ◆ m_EquivRangeBuilder ◆ m_NextIndex size_t CAlignDistGraph::m_NextIndex private ◆ NearestDistMap ◆ NearestMap

The documentation for this class was generated from the following file:

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