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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/cidtool_8cpp_source.html below:

NCBI C++ ToolKit: src/app/grid/util/cidtool.cpp Source File

53 #define OPT_DEF(opt_type, opt_id) CCommandLineParser::opt_type, opt_id 55 #define OPT_DEF(opt_type, opt_id) CCommandLineParser::opt_type 86 "dump"

"Dump the contents of a CompoundID."

87 "Print the contents of the CompoundID specified on the " 88 "command line to the standard output stream (or a file)."

92 "make"

"Generate a CompoundID."

93 "Read CompoundID dump from the standard input stream " 94 "(or the specified file) and print the CompoundID that " 99 #define TOTAL_NUMBER_OF_COMMANDS int(sizeof(s_CommandDefinitions) / \ 100 sizeof(*s_CommandDefinitions)) 109 "Generate and decode identifiers in CompoundID format."

);

116 "EOption order must match positions in s_OptionDefinitions."

);

128 for

(cmd_opt = cmd_def->

options

; *cmd_opt >= 0; ++cmd_opt)

139 catch

(exception& e) {

144 for

(cmd_opt = cmd_def->

options

; *cmd_opt >= 0; ++cmd_opt)

147 const char

* opt_value;

149 while

(clparser.

NextOption

(&opt_id, &opt_value)) {

157

fprintf(stderr,

"%s: %s\n"

, opt_value,

strerror

(errno));

163

fprintf(stderr,

"%s: %s\n"

, opt_value,

strerror

(errno));

175 for

(

const int

* required_opt =

177

*required_opt != -1; ++required_opt)

180 ": option '--%s' requires option '--%s'.\n"

183

*required_opt].name_variants);

186 while

(--opt_id >= 0);

197 return

(this->*cmd_def->

cmd_proc

)();

200

fprintf(stderr,

"%s\n"

, e.

GetMsg

().c_str());

209

fprintf(stderr,

"%s\n"

, e.

what

());

212 catch

(

string

& s) {

213

fprintf(stderr,

"%s\n"

, s.c_str());

245

}

while

(bytes_read ==

sizeof

(

buffer

));

254 int main

(

int

argc,

const char

* argv[])

int Parse(int argc, const char *const *argv)

Parse the command line.

bool NextOption(int *opt_id, const char **opt_value)

void AddOption(EOptionType type, int opt_id, const string &name_variants, const string &description)

void AddCommand(int cmd_id, const string &name_variants, const string &synopsis, const string &usage, int cat_id=-1)

void AddAssociation(int cmd_id, int opt_id)

CCompoundID FromString(const string &cid)

Unpack the base64-encoded ID and return a CCompoundID object for field extraction.

CCompoundID FromDump(const string &cid_dump)

Restore the compound ID from its textual representation created by CCompoundID::Dump().

Base64-encoded ID string that contains extractable typed fields.

string Dump()

Dump the contents of the ID in the human-readable format that can also be parsed by CCompoundIDPool::...

string ToString()

Pack the ID and return its string representation.

#define GRID_APP_VERSION_INFO

#define INPUT_FILE_OPTION

#define OUTPUT_FILE_OPTION

int AppMain(int argc, const char *const *argv, const char *const *envp=0, EAppDiagStream diag=eDS_Default, const char *conf=NcbiEmptyCStr, const string &name=NcbiEmptyString)

Main function (entry point) for the NCBI application.

const string & GetMsg(void) const

Get message string.

virtual const char * what(void) const noexcept

Standard report (includes full backlog).

unsigned int

A callback function used to compare two keys in a database.

Parameters initialization model.

NCBI C++ stream class wrappers for triggering between "new" and "old" C++ stream libraries.

const char * name_variants

int(CGridCommandLineInterfaceApp::* cmd_proc)()

int options[eNumberOfOptions+1]

CCommandLineParser::EOptionType type

const char * name_variants

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