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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/chimera__panel_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/packages/pkg_sequence_edit/chimera_panel.cpp Source File

76

objects::CSeq_entry_Handle seh,

79

wxWindowID

id

const

wxPoint& pos,

const

wxSize&

size

long

style )

81

m_CmdProcessor(processor),

82

m_Workbench(workbench)

96

wxPanel::Create( parent,

id

, pos,

size

, style );

101

GetSizer()->SetSizeHints(

this

);

150

wxBoxSizer* itemBoxSizer2 =

new

wxBoxSizer(wxVERTICAL);

151

itemPanel1->SetSizer(itemBoxSizer2);

153

wxStaticText* itemStaticText3 =

new

wxStaticText( itemPanel1, wxID_STATIC,

(

"For bacteria and archaea 16S ribosomal RNA sequences, please verify the sequences in your submission file have been quality checked and anomalous sequences, including chimeras, vector, misassemblies and low quality sequences, have been removed or trimmed where appropriate.\n\nDid you screen your sequences for 16S rRNA artifacts and remove anomalous sequences prior to preparing this submission?"

), wxDefaultPosition, wxDefaultSize, 0 );

154

itemStaticText3->Wrap(600);

155

itemBoxSizer2->Add(itemStaticText3, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

157

wxBoxSizer* itemBoxSizer4 =

new

wxBoxSizer(wxHORIZONTAL);

158

itemBoxSizer2->Add(itemBoxSizer4, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

160 m_Yes

new

wxRadioButton( itemPanel1,

ID_YES

(

"Yes (please provide program and version used to screen)"

), wxDefaultPosition, wxDefaultSize, 0 );

161 m_Yes

->SetValue(

false

);

162

itemBoxSizer4->Add(

m_Yes

, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

164 m_No

new

wxRadioButton( itemPanel1,

ID_NO

(

"No"

), wxDefaultPosition, wxDefaultSize, 0 );

165 m_No

->SetValue(

false

);

166

itemBoxSizer4->Add(

m_No

, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

169

itemBoxSizer2->Add(

m_ProgVerSizer

, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

196 if

table

|| !

table

->IsSetNum_rows() ||

table

->GetNum_rows() == 0) {

227 m_Yes

->SetValue(

true

);

228 m_No

->SetValue(

false

);

239 m_Yes

->SetValue(

false

);

240 m_No

->SetValue(

true

);

284

wxWindow* w = this->GetParent();

const string kChimeraLabel

const string kChimeraField

wxIcon GetIconResource(const wxString &name)

Retrieves icon resources.

objects::CSeq_entry_Handle m_Seh

void OnNoSelected(wxCommandEvent &event)

wxEVT_COMMAND_RADIOBUTTON_SELECTED event handler for ID_NO

~CChimeraPanel()

Destructor.

wxBoxSizer * m_ProgVerSizer

CSubPrepFieldEditor * m_ProgramVersionField

void x_ShowYes(CTableFieldCommandConverter *converter)

CChimeraPanel()

Constructors.

wxBitmap GetBitmapResource(const wxString &name)

Retrieves bitmap resources.

void CreateControls()

Creates the controls and sizers.

void OnYesSelected(wxCommandEvent &event)

wxEVT_COMMAND_RADIOBUTTON_SELECTED event handler for ID_YES

bool Create(wxWindow *parent, wxWindowID id=10095, const wxPoint &pos=wxDefaultPosition, const wxSize &size=wxSize(400, 300), long style=wxTAB_TRAVERSAL)

Creation.

void Init()

Initialises member variables.

static bool ShowToolTips()

Should we show tooltips?

ICommandProccessor * m_CmdProcessor

CSubPrep_panel * x_GetParent()

void SetConverter(string label, string column_name, CTableFieldCommandConverter *converter, bool must_choose=false, bool required=false, string default_val="", string url="", bool allow_mix=true)

static string GetWizardFieldFromSeqEntry(objects::CSeq_entry_Handle entry, string field_name)

static CRef< CCmdComposite > SetWizardFieldInSeqEntry(objects::CSeq_entry_Handle entry, string field_name, string value)

CSourceRequirements::EWizardSrcType GetWizardSrcType()

virtual CRef< objects::CSeq_table > GetValuesTableFromSeqEntry(objects::CSeq_entry_Handle seh)=0

Undo/Redo interface for editing operations.

virtual void Execute(IEditCommand *command, wxWindow *window=0)=0

IWorkbench is the central interface in the application framework.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

static bool EqualNocase(const CTempString s1, SIZE_TYPE pos, SIZE_TYPE n, const char *s2)

Case-insensitive equality of a substring with another string.

<!DOCTYPE HTML >< html > n< header > n< title > PubSeq Gateway Help Page</title > n< style > n table

const struct ncbi::grid::netcache::search::fields::SIZE size

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