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1 #ifndef CDDALIGNVIEW__H 2 #define CDDALIGNVIEW__H 51 #define CAV_LEFTTAILS 0x04 52 #define CAV_RIGHTTAILS 0x08 53 #define CAV_CONDENSED 0x10 54 #define CAV_DEBUG 0x20 55 #define CAV_HTML_HEADER 0x40 56 #define CAV_SHOW_IDENTITY 0x80 57 #define CAV_FASTA 0x0100 58 #define CAV_FASTA_LOWERCASE 0x0200 59 #define CAV_ANNOT_BOTTOM 0x0400 60 #define CAV_NO_PARAG_COLOR 0x0800 61 #define CAV_NO_CHANGE_DIAG 0x1000 62 #define CAV_IGNORE_BAD_ALN 0x2000 96 const void*asnDataBlock,
99 unsigned intparagraphWidth,
100 doubleconservationThreshhold,
108 #define CAV_SUCCESS 0 109 #define CAV_ERROR_BAD_PARAMS 1 110 #define CAV_ERROR_BAD_ASN 2 111 #define CAV_ERROR_SEQUENCES 3 112 #define CAV_ERROR_ALIGNMENTS 4 113 #define CAV_ERROR_PAIRWISE 5 114 #define CAV_ERROR_DISPLAY 6 124 const void*asnDataBlock,
126 unsigned intoptions,
127 unsigned intparagraphWidth,
128 doubleconservationThreshhold,
138 constncbi::objects::CNcbi_mime_asn1& mime,
139 unsigned intoptions,
140 unsigned intparagraphWidth,
141 doubleconservationThreshhold,
User-defined methods of the data storage class.
int CAV_DisplayMultiple(const void *asnDataBlock, int asnSize, unsigned int options, unsigned int paragraphWidth, double conservationThreshhold, const char *title, int nFeatures, const AlignmentFeature *features)
Include a standard set of the NCBI C++ Toolkit most basic headers.
IO_PREFIX::ostream CNcbiOstream
Portable alias for ostream.
NCBI C++ stream class wrappers for triggering between "new" and "old" C++ stream libraries.
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