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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/blast__hitmatrix_8hpp_source.html below:

NCBI C++ ToolKit: src/gui/app/blastfmt/blast_hitmatrix.hpp Source File

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& font_path =

(

fileName) {m_File = fileName;m_FileOut =

;}

WriteToFile(

);

x_InitObjectManager();

x_GetLabels(

);

x_RenderImage(

);

x_PreProcess(

);

x_Render(

);

x_InitGraphics(

& font_path =

);

This class displays the image of the hitmatrix view for blast 2 seq results.

std::ofstream out("events_result.xml")

main entry point for tests

CRef< CScope > m_Scope

Current scope.

CRef< CGlOsContext > m_Context

CGlOsContext context.

int m_Height

Image height.

bool IsFileOut(void)

Checks if image is to be written to the file.

string m_SubjectID

Subject label id.

vector< CConstRef< CSeq_align > > m_Aligns

Vector of seqaligns.

string GetNetcacheID(void)

Get netcache ID for the image stored in netcache.

CImageIO::EType m_Format

Image format (png,bmp etc)

CRef< CObjectManager > m_ObjMgr

Object manager.

bool m_FileOut

true if output to the file

void SetThumbnail(bool set)

Indicates that thumbmail should be shown.

unique_ptr< CHitMatrixRenderer > m_Renderer

Renderer setup Parameter.

CIRef< IHitMatrixDataSource > m_DataSource

Renderer setup Parameter.

string m_ImageKey

netcacheID

~CBlastHitMatrix()

Destructor.

void SetFileName(string fileName)

Inits file name if image is written to the file.

string GetErrorMessage(void)

Get error message.

string m_QueryID

Query label id.

CGlPane m_Port

Renderer setup Parameter.

string m_ErrorMessage

Error message.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define BEGIN_SCOPE(ns)

Define a new scope.

IO_PREFIX::ostream CNcbiOstream

Portable alias for ostream.

#define NCBI_XBLASTFORMAT_EXPORT

The blob sat and sat key Both must be positive integers</td > n< td > Non empty string The interpretation of the blob id depends on a processor Cassandra n processor expects the following format

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