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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/biotree__selection_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/objutils/biotree_selection.cpp Source File

48

m_BioTreeContainer(bioTree)

57  if

(!(*it)->CanGetName() || !(*it)->CanGetId())

59  string

feat_name((*it)->GetName());

68  if

(!(*itNode)->CanGetId())

78  string

feat_name(feature);

85  string

feat_name(feature);

87  return

(featureId !=

m_FeatIdsMap

.end()) ? featureId->second : -1;

92

TNodeIdNodeMap::const_iterator node =

m_NodesMap

.find(nodeId);

110  if

(!(*itFeature)->CanGetFeatureid())

113  if

(featureId != (*itFeature)->GetFeatureid())

116  if

(!(*itFeature)->CanGetValue())

119  return

(*itFeature)->GetValue();

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

Defines CBioTreeSelection, class used to broadcast selected tree nodes between views.

CBioTreeSelection(const CConstRef< objects::CBioTreeContainer > &bioTree)

Constructor.

TNodeIdNodeMap m_NodesMap

Map od node ids to nodes.

CConstRef< objects::CBioTreeContainer > m_BioTreeContainer

BioTree.

std::string GetFeatureValue(objects::CNode::TId nodeId, objects::CFeatureDescr::TId featureId) const

Gets the value of a feature for the specified node id.

objects::CFeatureDescr::TId GetFeatureId(const std::string &feature) const

Gets the id of the specified feature.

TStringFeatIdMap m_FeatIdsMap

bool HasFeature(const std::string &feature) const

Checks if the BioTree has the specified feature.

#define ITERATE(Type, Var, Cont)

ITERATE macro to sequence through container elements.

bool IsNull(void) const THROWS_NONE

Check if pointer is null – same effect as Empty().

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

static string & ToLower(string &str)

Convert string to lower case – string& version.

list< CRef< CFeatureDescr > > Tdata

bool CanGet(void) const

Check if it is safe to call Get method.

list< CRef< CNodeFeature > > Tdata

bool CanGet(void) const

Check if it is safe to call Get method.

bool CanGetFeatures(void) const

Check if it is safe to call GetFeatures method.

list< CRef< CNode > > Tdata

const Tdata & Get(void) const

Get the member data.

bool CanGet(void) const

Check if it is safe to call Get method.

const Tdata & Get(void) const

Get the member data.

const TFeatures & GetFeatures(void) const

Get the Features member data.

const Tdata & Get(void) const

Get the member data.


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