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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/biosourcepanel_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/widgets/edit/biosourcepanel.cpp Source File

29 #include "wx/wxprec.h" 57 #include <wx/statbox.h> 58 #include <wx/treebook.h> 105

m_Source(

source

), m_ParentPanel(desc_editor)

119 

wxPanel::Create( parent,

id

, pos,

size

, style );

124

GetSizer()->SetSizeHints(

this

);

165

wxBoxSizer* itemBoxSizer2 =

new

wxBoxSizer(wxVERTICAL);

166

itemPanel1->SetSizer(itemBoxSizer2);

168

wxBoxSizer* itemBoxSizer3 =

new

wxBoxSizer(wxHORIZONTAL);

169

itemBoxSizer2->Add(itemBoxSizer3, 0, wxGROW|wxALL, 5);

171

wxStaticText* itemStaticText4 =

new

wxStaticText( itemPanel1, wxID_STATIC,

_

(

"Scientific Name"

), wxDefaultPosition, wxDefaultSize, 0 );

172

itemBoxSizer3->Add(itemStaticText4, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

178

wxButton* itemButton6 =

new

wxButton( itemPanel1,

ID_ORGPANEL_BTN

,

_

(

"Taxonomy Lookup"

), wxDefaultPosition, wxDefaultSize, 0 );

179

itemBoxSizer3->Add(itemButton6, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

185

wxStaticBox* itemStaticBoxSizer8Static =

new

wxStaticBox(itemPanel1,

ID_ORGPANEL_SIZER

,

_

(

"Additional Modifiers"

));

186

wxStaticBoxSizer* itemStaticBoxSizer8 =

new

wxStaticBoxSizer(itemStaticBoxSizer8Static, wxVERTICAL);

187

itemBoxSizer2->Add(itemStaticBoxSizer8, 1, wxGROW|wxALL, 5);

190

itemStaticBoxSizer8->Add(

m_SrcModList

, 1, wxGROW | wxALL, 5);

199  if

(!wxPanel::TransferDataToWindow())

207  if

(!wxPanel::TransferDataFromWindow())

217  if

(

m_Source

.GetOrg().IsSetTaxname()) {

225  bool

disable_strain_forwarding =

m_Source

.GetDisableStrainForwarding();

232  if

(

source

.IsSetOrgname()) {

247

old_taxname =

m_Source

.GetOrg().GetTaxname();

253  m_Source

.SetOrg().SetTaxname(new_taxname);

276

unique_ptr<CObjectOStream>

332

vector<CRef<COrg_ref> > rq_list;

335

rq_list.push_back(org);

341

CTaxon3_reply::TReply::const_iterator reply_it = reply->GetReply().begin();

342  if

((*reply_it)->IsData()) {

343  m_Source

.SetOrg().Assign((*reply_it)->GetData().GetOrg());

365

wxWindow* w = this->GetParent();

367

wxTreebook* parent =

dynamic_cast<

wxTreebook*

>

(w);

394

otherPanel->OnChangedTaxname();

397

loc_gc_panel->OnChangedTaxname();

static void s_MoreCleanupForTaxnameChange(CBioSource &source)

bool AutoComplete(wxTextCompleter *completer)

CSrcModListPanel * m_SrcModList

wxBitmap GetBitmapResource(const wxString &name)

Retrieves bitmap resources.

IDescEditorPanel * m_ParentPanel

void OnUpdatedTaxname(wxMouseEvent &event)

wxIcon GetIconResource(const wxString &name)

Retrieves icon resources.

void CreateControls()

Creates the controls and sizers.

CAutoCompleteTextCtrl * m_ScientificNameCtrl

static bool ShowToolTips()

Should we show tooltips?

void PopulateBioSource(objects::CBioSource &source)

void OnEvtText(wxCommandEvent &event)

void OnTaxonomyLookup(wxCommandEvent &event)

wxEVT_COMMAND_BUTTON_CLICKED event handler for ID_ORGPANEL_BTN

void Init()

Initialises member variables.

wxCheckBox * m_DisableStrainForwardingBtn

wxTreebook * m_ParentTreebook

bool Create(wxWindow *parent, wxWindowID id=ID_ORGANISMNAMEPANEL, const wxPoint &pos=wxDefaultPosition, const wxSize &size=wxSize(400, 300), long style=wxTAB_TRAVERSAL)

Creation.

virtual bool TransferDataFromWindow()

objects::CBioSource & m_Source

virtual bool TransferDataToWindow()

~CBioSourcePanel()

Destructor.

CBioSourcePanel()

Constructors.

CNcbiOstrstreamToString class helps convert CNcbiOstrstream to a string Sample usage:

void TransferFromOrgRef(const objects::COrg_ref &org)

virtual bool TransferDataFromWindow()

void PopulateModifiers(objects::CBioSource &biosrc)

void OnChangedTaxname(void)

void SetSource(const objects::CBioSource &biosrc)

virtual CRef< CTaxon3_reply > SendOrgRefList(const vector< CRef< COrg_ref > > &list, COrg_ref::fOrgref_parts result_parts=COrg_ref::eOrgref_default, fT3reply_parts t3result_parts=eT3reply_default)

virtual void UpdateTaxname()

std::ofstream out("events_result.xml")

main entry point for tests

void CleanupForTaxnameChange(CObjectInfo oi)

virtual void Assign(const CSerialObject &source, ESerialRecursionMode how=eRecursive)

Set object to copy of another one.

@ eSerial_AsnText

ASN.1 text.

static CObjectOStream * Open(ESerialDataFormat format, CNcbiOstream &outStream, bool deleteOutStream)

Create serial object writer and attach it to an output stream.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

static bool IsBlank(const CTempString str, SIZE_TYPE pos=0)

Check if a string is blank (has no text).

static void TruncateSpacesInPlace(string &str, ETrunc where=eTrunc_Both)

Truncate whitespace in a string (in-place)

static bool Equal(const CTempString s1, SIZE_TYPE pos, SIZE_TYPE n, const char *s2, ECase use_case=eCase)

Test for equality of a substring with another string.

static string & ReplaceInPlace(string &src, const string &search, const string &replace, SIZE_TYPE start_pos=0, SIZE_TYPE max_replace=0, SIZE_TYPE *num_replace=0)

Replace occurrences of a substring within a string.

void ResetName(void)

Reset Name data member.

bool IsSetName(void) const

Check if a value has been assigned to Name data member.

@ eSubtype_gb_acronym

used by taxonomy database

@ eSubtype_gb_synonym

used by taxonomy database

@ eSubtype_gb_anamorph

used by taxonomy database

const struct ncbi::grid::netcache::search::fields::SIZE size

const CharType(& source)[N]

wxString ToWxString(const string &s)

string ToStdString(const wxString &s)


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