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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/bioseq__base__info_8hpp_source.html below:

NCBI C++ ToolKit: include/objmgr/impl/bioseq_base_info.hpp Source File

IsSetDescr(

)

;

CanGetDescr(

)

;

& GetDescr(

)

;

SetDescr(

& v);

ResetDescr(

);

AddSeq_descr(

& v);

& x_GetDescList(

)

;

x_IsEndDesc(

iter)

;

vector< CRef<CSeq_annot_Info> >

;

IsSetAnnot(

)

;

HasAnnots(

)

;

& GetAnnot(

)

;

& GetLoadedAnnot(

)

;

ResetAnnot(

);

x_SetAnnot(

);

x_AddAnnotChunkId(

chunk_id);

& x_GetDescrChunkIds()

;

x_RealLoadDescr(

& v);

x_IsEndNextDesc(

iter)

;

set< string > TUserObjectTypesSet

bool IsSetDescr(void) const

virtual void x_SetDescr(TDescr &v)=0

TDescList::const_iterator TDesc_CI

virtual bool x_CanGetDescr(void) const =0

CFastMutexGuard TDescrMutexGuard

bool IsSetAnnot(void) const

vector< TDescTypeMask > TDescTypeMasks

const TAnnot & GetAnnot(void) const

bool HasAnnots(void) const

TDescTypeMasks m_DescrTypeMasks

virtual TDescr & x_SetDescr(void)=0

virtual void x_ResetObjAnnot(void)=0

vector< CRef< CSeq_annot_Info > > TAnnot

const TAnnot & GetLoadedAnnot(void) const

virtual bool x_IsSetDescr(void) const =0

bool CanGetDescr(void) const

virtual void x_ResetDescr(void)=0

virtual TObjAnnot & x_SetObjAnnot(void)=0

virtual const TDescr & x_GetDescr(void) const =0

list< CRef< CSeq_annot > > TObjAnnot

@Seq_descr.hpp User-defined methods of the data storage class.

virtual void x_SetNeedUpdateParent(TNeedUpdateFlags flags)

virtual void x_DoUpdate(TNeedUpdateFlags flags)

virtual void x_DSDetachContents(CDataSource &ds)

bool x_NeedUpdate(ENeedUpdate flag) const

void x_Update(TNeedUpdateFlags flags) const

virtual void x_TSEAttachContents(CTSE_Info &tse)

@ fNeedUpdate_descr

specific fields of this object

virtual void x_DSAttachContents(CDataSource &ds)

virtual void x_TSEDetachContents(CTSE_Info &tse)

virtual void x_UpdateAnnotIndexContents(CTSE_Info &tse)

vector< TChunkId > TChunkIds

static DLIST_TYPE *DLIST_NAME() last(DLIST_LIST_TYPE *list)

static const struct type types[]

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define BEGIN_SCOPE(ns)

Define a new scope.

#define NCBI_XOBJMGR_EXPORT

list< CRef< CSeqdesc > > Tdata

Multi-threading – mutexes; rw-locks; semaphore.

Portable reference counted smart and weak pointers using CWeakRef, CRef, CObject and CObjectEx.

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