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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/bed__track__record_8cpp_source.html below:

NCBI C++ ToolKit: src/objtools/writers/bed_track_record.cpp Source File

Go to the documentation of this file.

Go to the SVN repository for this file.

61  for

(

auto

field: fields) {

62  switch

(field->Which()) {

66  mName

= field->GetName();

69  mTitle

= field->GetTitle();

72  const auto

& uo = field->GetUser();

73  if

(!uo.IsSetType() || !uo.GetType().IsStr() ||

74

uo.GetType().GetStr() !=

"Track Data"

) {

91  const auto

& fields = uo.

GetData

();

92  for

(

auto

field: fields) {

93  if

(!field->CanGetLabel() || ! field->GetLabel().IsStr()) {

96  if

(!field->CanGetData()) {

99  auto key

= field->GetLabel().GetStr();

101  const auto

&

value

= field->GetData();

103  switch

(

value

.Which()) {

107

valueStr =

value

.GetStr();

116  if

(valueStr.empty()) {

127  const string

&

key

)

const 130  auto val

= mKeyValuePairs.find(

key

);

131  if

(

val

== mKeyValuePairs.end()) {

151  if

(description.empty()) {

155  if

(!

mType

.empty()) {

156

ostr <<

" type=\""

<<

mType

<<

"\""

;

159

ostr <<

" name=\""

<< name <<

"\""

;

161  if

(!description.empty()) {

162

ostr <<

" description=\""

<< description <<

"\""

;

165  auto key

= pair.first;

166  auto value

= pair.second;

168  const

vector<string> ignoredKeys = {

"description"

,

"name"

,

"type"

};

169  const auto

keyIt = std::find(ignoredKeys.begin(), ignoredKeys.end(),

key

);

170  if

(keyIt != ignoredKeys.end()) {

173  string

quotesym =

"\""

;

177

ostr <<

" "

<<

key

<<

"="

<< quotesym <<

value

<< quotesym;

190  if

(useScore.empty()) {

193  return

(useScore ==

"1"

);

User-defined methods of the data storage class.

User-defined methods of the data storage class.

std::map< std::string, std::string > mKeyValuePairs

bool xImportKeyValuePairs(const CUser_object &)

std::string xGetKeyValue(const std::string &) const

bool Assign(const CSeq_annot &)

bool Write(CNcbiOstream &)

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

IO_PREFIX::ostream CNcbiOstream

Portable alias for ostream.

static string DoubleToString(double value, int precision=-1, TNumToStringFlags flags=0)

Convert double to string.

static string IntToString(int value, TNumToStringFlags flags=0, int base=10)

Convert int to string.

static bool StartsWith(const CTempString str, const CTempString start, ECase use_case=eCase)

Check if a string starts with a specified prefix value.

const TData & GetData(void) const

Get the Data member data.

const Tdata & Get(void) const

Get the member data.

const TDesc & GetDesc(void) const

Get the Desc member data.

bool IsSetDesc(void) const

used only for stand alone Seq-annots Check if a value has been assigned to Desc data member.

@ e_Name

a short name for this collection

@ e_Title

a title for this collection

@ e_User

user defined object

const struct ncbi::grid::netcache::search::fields::KEY key

const GenericPointer< typename T::ValueType > T2 value

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