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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/bed__column__data_8cpp_source.html below:

NCBI C++ ToolKit: src/objtools/readers/bed_column_data.cpp Source File

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44

mLineNo(lineData.mLine),

45

mColumnSeparator(

""

),

50  if

(

flags

& CBedReader::EBedFlags::fAddDefaultColumns) {

69  bool

splitSuccessful =

false

;

74  if

(

mData

.size() > 2) {

75

splitSuccessful =

true

;

82  if

(!splitSuccessful) {

85  if

(

mData

.size() > 2) {

86

splitSuccessful =

true

;

89  if

(!splitSuccessful) {

93  "Invalid data line: Unable to split data line into data columns"

);

112  if

(

mData

.size() < 3) {

116  "Invalid data line: Insufficient column count."

);

124  catch

(std::exception&) {

128  "Invalid data line: Invalid \"SeqStart\" (column 2) value."

);

136  catch

(std::exception&) {

140  "Invalid data line: Invalid \"SeqStop\" (column 3) value."

);

150  auto

columnCount =

mData

.size();

NStr::TSplitFlags mColumnSplitFlags

const string & operator[](size_t) const

void xCleanColumnValues()

void xAddDefaultColumns()

CBedColumnData(const CReaderBase::TReaderLine &, int flags=0)

void xSplitColumns(const string &)

The NCBI C++ standard methods for dealing with std::string.

static const char * column

@ eDiag_Error

Error message.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define BEGIN_SCOPE(ns)

Define a new scope.

static list< string > & Split(const CTempString str, const CTempString delim, list< string > &arr, TSplitFlags flags=0, vector< SIZE_TYPE > *token_pos=NULL)

Split a string using specified delimiters.

static void TruncateSpacesInPlace(string &str, ETrunc where=eTrunc_Both)

Truncate whitespace in a string (in-place)

static string & Replace(const string &src, const string &search, const string &replace, string &dst, SIZE_TYPE start_pos=0, SIZE_TYPE max_replace=0, SIZE_TYPE *num_replace=0)

Replace occurrences of a substring within a string.

static bool EqualNocase(const CTempString s1, SIZE_TYPE pos, SIZE_TYPE n, const char *s2)

Case-insensitive equality of a substring with another string.

@ fSplit_MergeDelimiters

Merge adjacent delimiters.

constexpr bool empty(list< Ts... >) noexcept

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