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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/atom__set_8hpp_source.html below:

NCBI C++ ToolKit: src/app/cn3d/atom_set.hpp Source File

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34 #ifndef CN3D_ATOMSET__HPP 35 #define CN3D_ATOMSET__HPP 98  bool

getAny =

false

,

bool

suppressWarning =

false

)

const

;

105  return

std::make_pair(ap.

mID

, std::make_pair(ap.

rID

, ap.

aID

));

108  typedef

std::map < AtomPntrKey, AtomAltList >

AtomMap

;

116  bool HasAlt

(

void

)

const

{

return

(

atomMap

.size()>0 && (*(

atomMap

.begin()->second.begin()))->HasAlt()); }

User-defined methods of the data storage class.

double averageTemperature

static const double NO_TEMPERATURE

static const double NO_OCCUPANCY

bool HasOccup(void) const

static const char NO_ALTCONFID

AtomCoord(StructureBase *parent)

const std::string * GetActiveEnsemble(void) const

AtomSet(StructureBase *parent, const ncbi::objects::CAtomic_coordinates &coords)

const AtomCoord * GetAtom(const AtomPntr &atom, bool getAny=false, bool suppressWarning=false) const

const std::string * activeEnsemble

std::list< const std::string * > EnsembleList

bool HasOccup(void) const

AtomPntrKey MakeKey(const AtomPntr &ap) const

std::list< const AtomCoord * > AtomAltList

std::pair< int, std::pair< int, int > > AtomPntrKey

bool SetActiveEnsemble(const std::string *ensemble)

std::map< AtomPntrKey, AtomAltList > AtomMap

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_SCOPE(ns)

Define a new scope.

The NCBI C++/STL use hints.


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