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NCBI C++ ToolKit: src/gui/widgets/loaders/assembly_list_panel.cpp Source File

wxPanel::Create( parent,

, pos,

, style );

GetSizer()->SetSizeHints(

);

wxBoxSizer* itemBoxSizer2 =

wxBoxSizer(wxVERTICAL);

itemPanel1->SetSizer(itemBoxSizer2);

wxStaticText* itemStaticText3 =

wxStaticText( itemPanel1, wxID_STATIC,

(

), wxDefaultPosition, wxDefaultSize, 0 );

itemStaticText3->SetFont(wxFont(wxNORMAL_FONT->GetPointSize(), wxNORMAL_FONT->GetFamily(), wxNORMAL_FONT->GetStyle(), wxFONTWEIGHT_BOLD, wxNORMAL_FONT->GetUnderlined(), wxNORMAL_FONT->GetFaceName()));

itemBoxSizer2->Add(itemStaticText3, 0, wxALIGN_LEFT|wxALL, 5);

wxBoxSizer* itemBoxSizer4 =

wxBoxSizer(wxHORIZONTAL);

itemBoxSizer2->Add(itemBoxSizer4, 0, wxALIGN_LEFT|wxALL, 5);

wxStaticText* itemStaticText5 =

wxStaticText( itemPanel1, wxID_STATIC,

(

), wxDefaultPosition, wxDefaultSize, 0 );

itemBoxSizer4->Add(itemStaticText5, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

->SetToolTip(

(

));

itemBoxSizer4->Add(

, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

wxButton* itemButton7 =

wxButton( itemPanel1,

,

(

), wxDefaultPosition, wxDefaultSize, 0 );

itemButton7->SetDefault();

itemBoxSizer4->Add(itemButton7, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

wxStaticBox* itemStaticBoxSizer8Static =

wxStaticBox(itemPanel1,

,

(

));

wxStaticBoxSizer* itemStaticBoxSizer8 =

wxStaticBoxSizer(itemStaticBoxSizer8Static, wxHORIZONTAL);

itemBoxSizer2->Add(itemStaticBoxSizer8, 1, wxGROW|wxALL, 5);

itemStaticBoxSizer8->Add(

, 1, wxGROW|wxALL, 5);

wxStaticBox* itemStaticBoxSizer10Static =

wxStaticBox(itemPanel1,

,

(

));

wxStaticBoxSizer* itemStaticBoxSizer10 =

wxStaticBoxSizer(itemStaticBoxSizer10Static, wxHORIZONTAL);

itemBoxSizer2->Add(itemStaticBoxSizer10, 0, wxALIGN_LEFT|wxALL, 5);

=

wxRadioButton( itemPanel1,

,

(

), wxDefaultPosition, wxSize(itemPanel1->ConvertDialogToPixels(wxSize(53, -1)).x, -1), wxRB_GROUP );

itemStaticBoxSizer10->Add(

, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

=

wxRadioButton( itemPanel1,

,

(

), wxDefaultPosition, wxSize(itemPanel1->ConvertDialogToPixels(wxSize(53, -1)).x, -1), 0 );

autoCompleteSupported =

;

(autoCompleteSupported) {

autoCompleteSupported =

;

(

<<

);

textCompleter;

vector<string> assms;

vector<int> rows_selected;

(vector<int>, r_iter, rows_selected) {

assms.push_back(

[*r_iter]);

& description)

other_names +=

;

pos = name_iter->find_first_of(

);

(pos != string::npos) {

( !other_names.empty() ) {

name +=

+ other_names +

;

wxMessageBox(

(

),

(

),

wxOK | wxICON_ERROR,

);

wxMessageBox(

(

),

(

),

wxOK | wxICON_ERROR,

);

wxMessageBox(

(

),

(

),

wxOK | wxICON_ERROR,

);

release_str =

;

release_str =

;

CDL_AssmInfo::TAssemblies::iterator iter = items.begin();

(iter != items.end()) {

( !(*iter)->IsSetRelease_type() ||

(*iter)->GetRelease_type() != release_str) {

iter = items.erase(iter);

.push_back((*iter)->GetAccession());

name = assm.

();

other_names +=

;

pos = name_iter->find_first_of(

);

(pos != string::npos) {

( !other_names.empty() ) {

name +=

+ other_names +

;

(items.size() == 1) {

(

->GetValue().IsEmpty()) {

wxMessageBox(

(

),

(

),

wxOK | wxICON_ERROR,

);

std::exception_ptr excp;

(

<<

<< term);

excp = std::current_exception();

excp = std::current_exception();

std::rethrow_exception(excp);

(

exception&) {

errMsg =

+

+

;

,

));

User-defined methods of the data storage class.

User-defined methods of the data storage class.

static CStringHistory s_History(50, "Dialogs.AssemblyListPanel")

static const char * kReleaseTypeTag

static CRef< objects::CDL_AssmInfo > GetAssms_Term(const string &term, const string &release_type=NcbiEmptyString, ICanceled *cancel=0)

static CRef< objects::CDL_AssmInfo > GetAssms_Gi(TGi gi, const string &release_type=NcbiEmptyString)

void SaveSettings() const

wxRadioButton * m_ReleaseTypeRefSeq

wxRadioButton * m_ReleaseTypeAll

void SetSearchTerm(const string &term)

bool Create(wxWindow *parent, wxWindowID id=ID_CASSEMBLYLISTPANEL, const wxPoint &pos=wxDefaultPosition, const wxSize &size=wxSize(266, 184), long style=wxWANTS_CHARS|wxTAB_TRAVERSAL)

void OnGenbankbuttonSelected(wxCommandEvent &event)

wxEVT_COMMAND_RADIOBUTTON_SELECTED event handler for ID_GENBANKBUTTON

wxIcon GetIconResource(const wxString &name)

Retrieves icon resources.

wxBitmap GetBitmapResource(const wxString &name)

Retrieves bitmap resources.

void x_SetTextCompleter(wxTextCompleter *textCompleter)

void SetMultiSelection(bool flag)

objects::CDL_AssmInfo::TAssemblies m_OrigItems

void OnAllbuttonSelected(wxCommandEvent &event)

wxEVT_COMMAND_RADIOBUTTON_SELECTED event handler for ID_ALLBUTTON

void OnFindGenomes(wxCommandEvent &event)

wxEVT_COMMAND_BUTTON_CLICKED event handler for ID_BUTTON4

void SetRegistryPath(const string &path)

vector< string > GetSelectedAssemblies() const

Get accessions of all selected assemblies.

void GetAssmNameAndDesc(const string &accession, string &name, string &description) const

Get the name and (if available) description for an accession.

string GetSearchTerm() const

std::unique_ptr< async_job > m_Future

void x_UpdateSearchTerm()

void x_LoadTableSettings()

void SetDescr(const wxString &descr)

CAutoCompleteTextCtrl * m_Term

void x_ShowStatus(const string &status)

wxRadioButton * m_ReleaseTypeGenBank

void SetMainTitle(const wxString &title)

static bool ShowToolTips()

CwxTableListCtrl * m_ItemList

void OnFindEnter(wxCommandEvent &event)

wxEVT_COMMAND_TEXT_ENTER event handler for ID_TEXTCTRL7

void OnRefseqbuttonSelected(wxCommandEvent &event)

wxEVT_COMMAND_RADIOBUTTON_SELECTED event handler for ID_REFSEQBUTTON

bool m_MultiSelection

indicates if multiple selections are allowed.

bool AutoComplete(wxTextCompleter *completer)

CRegistryWriteView GetWriteView(const string &section)

get a read-write view at a particular level.

static CGuiRegistry & GetInstance()

access the application-wide singleton

CRegistryReadView GetReadView(const string &section) const

get a read-only view at a particular level.

class CRegistryReadView provides a nested hierarchical view at a particular key.

int GetInt(const string &key, int default_val=0) const

access a named key at this level, with no recursion

void Set(const string &key, int val)

access a named key at this level, with no recursion

void AddString(const wxString &str)

wxTextCompleter * CreateCompleter()

CwxTextTableModel - very simple model for storing SMALL numbers fo strings.

virtual void Init(int n_cols, int n_rows)

virtual void SetStringValueAt(int row, int col, const wxString &value)

CwxTableListCtrl - generic wxListCtrl-based Table Control.

IwxTableModel * GetModel() const

void LoadTableSettings(const CRegistryReadView &view, bool byName=false)

wxArrayInt GetDataRowsSelected() const

void SaveTableSettings(CRegistryWriteView &view, bool saveSorting=true) const

void SetModel(IwxTableModel *data_model, bool own=false)

Interface for testing cancellation request in a long lasting operation.

virtual int GetNumColumns() const =0

Returns the number of columns in the model.

static DLIST_TYPE *DLIST_NAME() first(DLIST_LIST_TYPE *list)

static const column_t columns[]

#define ITERATE(Type, Var, Cont)

ITERATE macro to sequence through container elements.

#define LOG_POST(message)

This macro is deprecated and it's strongly recomended to move in all projects (except tests) to macro...

void Error(CExceptionArgs_Base &args)

const string & GetMsg(void) const

Get message string.

void Info(CExceptionArgs_Base &args)

CSeq_id & Set(const CTempString &the_id, TParseFlags flags=fParse_AnyRaw)

Reassign based on flat specifications; arguments interpreted as with constructors.

const CSeq_id & GetId(const CSeq_loc &loc, CScope *scope)

If all CSeq_ids embedded in CSeq_loc refer to the same CBioseq, returns the first CSeq_id found,...

@ eGetId_ForceGi

return only a gi-based seq-id

static CRef< CObjectManager > GetInstance(void)

Return the existing object manager or create one.

CBioseq_Handle GetBioseqHandle(const CSeq_id &id)

Get bioseq handle by seq-id.

void AddDefaults(TPriority pri=kPriority_Default)

Add default data loaders from object manager.

const CSeq_id_Handle & GetSeq_id_Handle(void) const

Get handle of id used to obtain this bioseq handle.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

virtual bool IsCanceled(void) const =0

static string TruncateSpaces(const string &str, ETrunc where=eTrunc_Both)

Truncate whitespace in a string.

bool CanGetOrganism(void) const

Check if it is safe to call GetOrganism method.

list< string > TOther_names

const TRelease_date & GetRelease_date(void) const

Get the Release_date member data.

bool CanGetRelease_type(void) const

Check if it is safe to call GetRelease_type method.

const TClass & GetClass(void) const

Get the Class member data.

const TOther_names & GetOther_names(void) const

Get the Other_names member data.

const TDescr & GetDescr(void) const

Get the Descr member data.

bool CanGetOther_names(void) const

Check if it is safe to call GetOther_names method.

const TAccession & GetAccession(void) const

Get the Accession member data.

const TName & GetName(void) const

Get the Name member data.

bool CanGetClass(void) const

Check if it is safe to call GetClass method.

list< CRef< CDL_Assembly > > TAssemblies

const TRelease_type & GetRelease_type(void) const

Get the Release_type member data.

const TOrganism & GetOrganism(void) const

Get the Organism member data.

const TAssemblies & GetAssemblies(void) const

Get the variant data.

bool CanGetDescr(void) const

Check if it is safe to call GetDescr method.

bool CanGetRelease_date(void) const

Check if it is safe to call GetRelease_date method.

job_function_traits< _Fty >::future job_async(const _Fty &_Fnarg, const string &descr)

static void text(MDB_val *v)

const struct ncbi::grid::netcache::search::fields::SIZE size

#define row(bind, expected)

wxString ToWxString(const string &s)

string ToStdString(const wxString &s)

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