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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/alnmulti__renderer_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/widgets/aln_multiple/alnmulti_renderer.cpp Source File

m_ResizableColumnIndex(-1),

*v = (

*)glGetString(GL_VERSION);

glClear(GL_COLOR_BUFFER_BIT | GL_DEPTH_BUFFER_BIT);

(std::exception &e)

(!

.empty())

gl.

(GL_LINES);

.NotNull();

.NotNull();

row_top_y = vp_top - model_y;

vp_y = vp_top - y;

row_top_y = vp_top1 - model_y;

stringstream statistics;

formatter.

(

, statistics.str());

rcV.

(rc_vp.Height() - 1, 0);

->PrepareRendering(pane, vp_top_y, 0);

->GetTooltip(pt,

, pane, *formatter);

formatter->Render();

->GetStringAtPos(base, pos);

formatter->Render();

(!formatter->IsEmpty())

formatter->AddDividerRow();

(!(symbol = base[0]))

(

->UsesAATranslation())

colstat =

(1, symbol);

formatter->AddRow(

, colstat);

colstat =

(1, symbol);

formatter->AddRow(

, colstat);

base_width =

->UsesAATranslation() &&

->IsNucProtAlignment() ? 3 : 1;

(

= -1;

< num_rows;

++)

(itrow ==

|| itrow == consensus_row)

(!(symbol = base[0]))

(MapCharInt, itr, counters)

sym = itr->first;

num = itr->second;

(sym ==

)

(sym == symbol)

->GetRowStatistics(*formatter);

formatter->Render();

(

= 0;

< n_col;

++)

align_visible =

;

h += (

->GetHeightPixels() - 1);

,

,

);

p_areas->push_back(area);

iFirst =

(iFirst, 0);

(

= iFirst;

<= iLast;

++)

= base_state;

->PrepareRendering(pane, row_top,

);

(

i_col = 0; i_col < col_n; i_col++)

->GetHTMLActiveAreas(

, pane, *areas);

(std::exception &e)

(!

.empty())

vector<string> col_text;

col_text.resize(col_n);

(

= 0;

< num_rows; ++

) {

(

i_col = 0; i_col < col_n; i_col++) {

(col_text[i_col].length() <

.length())

col_text[i_col] =

;

(

= 0;

< col_text.size(); ++

) {

(col_text[

].

())

(vp_y < top && vp_y > limit)

model_y = offset_y - vp_y;

master_row->

(port, layout_only);

iFirst =

(iFirst, 0);

(

= iFirst;

<= iLast;

++)

p_row->

(port, layout_only);

(

)m_Columns.size();

(index >= 0 && index < (

)m_Columns.size());

m_Columns[index];

(index >= 0 && index < (

)m_Columns.size());

m_Columns[index];

InsertColumn(index, width,

,

);

(index >= 0 && index <= (

)m_Columns.size());

TColumnVector::const_iterator it =

m_Columns.insert(m_Columns.begin() + index, col);

=

(it - m_Columns.begin());

(m_ResizableColumnIndex >= 0 && m_ResizableColumnIndex < (

)m_Columns.size())

(m_ResizableColumnIndex >=

)

m_ResizableColumnIndex++;

m_ResizableColumnIndex =

;

(index >= 0 && index < (

)m_Columns.size())

m_ResizableColumnIndex = index;

SetResizableColumn(resizable_index);

width =

(width, 0);

m_Columns[index].m_Width = width;

m_Columns[index].m_Pos = pos;

(index >= 0 && index < (

)m_Columns.size());

m_Columns[index].m_UserData =

;

(index >= 0 && index < (

)m_Columns.size());

&col = m_Columns[index];

(

= index + 1;

!= 0 &&

< (

)m_Columns.size();

++)

m_Columns[

].m_Pos +=

;

(index >= 0 && index < (

)m_Columns.size());

m_Columns[index].m_Visible;

(rs_index < m_Columns.size());

rs_name = m_Columns[rs_index].m_Name;

vector<SColumn> new_columns;

(

= 0;

< m_Columns.size();

++)

(m_Columns[

].m_Name == col.

)

new_columns.push_back(m_Columns[

]);

m_Columns.erase(m_Columns.begin() +

);

new_columns.insert(new_columns.end(), m_Columns.begin(), m_Columns.end());

m_Columns = new_columns;

(

j = 0; j < m_Columns.size(); j++)

(m_Columns[j].m_Name == rs_name)

SetResizableColumn((

)rs_index);

.push_back(it->m_Name);

(it->m_Visible && x >= it->m_Pos && x < it->m_Pos + it->m_Width)

(it - m_Columns.begin());

m_ResizableColumnIndex;

w = m_rcBounds.Width();

n_col = (

)m_Columns.size();

(w > 0 && n_col > 0)

(

j = 0; j < n_col; j++)

(col.

&& j != m_ResizableColumnIndex)

(

j = 0; j < n_col; j++)

(j == m_ResizableColumnIndex)

w_rest = w - total_w;

col.

= w_rest > 0 ? w_rest : 0;

User-defined methods of the data storage class.

const int kDefColumnWidth

static const int kRulerSpace

static const int kMasterRowSpace

int m_ResizableColumnIndex

void x_RenderRuler(TAreaVector *p_areas)

void x_RenderRow(IAlignRow *row, CGlPane &pane, int state, TVPUnit row_top, TAreaVector *areas)

TVPPoint m_TooltipVPPos

is it invoked by alnmulti.cgi

CAlnMultiHeader & GetHeader()

int x_GetLineByVPY(int vp_y) const

virtual void UpdateOnDataChanged()

bool IsColumnVisible(int index) const

virtual void Resize(const TVPRect &rc)

TColumnType GetColumnTypeByX(int vp_x) const

void SetContext(IAlnMultiRendererContext *pContext)

void SetColumnsByStyle(CWidgetDisplayStyle &style)

virtual int GetColumnsCount() const

virtual void SetupColumns(const TVPRect &rc)

Adds default columns for the renderer, allows custom setup (column icon override, etc)

int InsertColumn(int pos, int width, const string &label, int data)

bool m_bCgiMode

indicate whether it shoulde be rendered using "focused" color or not

TColumnType x_GetColumnType(const SColumn &C)

virtual int GetColumnIndexByX(int x) const

void x_AddStatisticsRow(ITooltipFormatter &formatter, const string &tag, int part, int total)

void x_RenderAlignAreaTopLine()

virtual bool NeedTooltip(int vp_x, int vp_y)

vector< SColumn > TColumnVector

void x_RenderHeader(TAreaVector *p_areas)

TVPRect GetMasterArea() const

virtual const SColumn & GetColumn(int index) const

void SetColumnUserData(int index, int data)

virtual int GetResizableColumnIndex() const

void x_RenderItems(TAreaVector *p_areas)

void x_RenderMasterRow(TAreaVector *p_areas)

IAlignRow::TColumnType TColumnType

virtual ~CAlnMultiRenderer()

void x_RenderItemsRange(int iFisrt, int iLast, TAreaVector *p_areas)

void AutoFitColumns(const CGlTextureFont &font, bool for_printer)

void GetVisibleColumns(vector< string > &labels)

CRgbaColor m_MasterBackColor

CAlnMultiRenderer()

Empty object constructor – for two-phase construction call SetupColums() to finish the class construc...

IAlnMultiRendererContext * m_Context

IAlnMultiRendererContext * x_GetContext()

void x_InvalidateRows(bool layout_only=false)

TVPRect GetColumnRectByType(TColumnType type, bool include_header) const

void SetColumns(const vector< SColumn > &columns, int resizable_index)

virtual int HitTest(int vp_x, int vp_y, int &col)

void SetColumnPos(int index, int pos)

int GetColumnIndexByType(TColumnType type) const

const CRgbaColor & GetBackColor() const

void SetColumnWidth(int index, int width)

void SetBackColor(const CRgbaColor Color)

void x_PrepareMasterPane(CGlPane &pane)

CWeakIRef< IAlignRow > m_TooltipRow

virtual string GetTooltip()

string x_GetRowTooltip(const TVPPoint &pt, IAlignRow *p_row, int i_col, int vp_top_y)

void SetColumnVisible(int index, bool b_visible)

virtual string GetAlignmentTooltip(int x, int y, IAlignRow *row, bool master)

virtual void Render()

renders OpenGL graphics

int GetVPListTop() const

return OpenGL viewport coordinate of the top pixel in the list area

const CRgbaColor & GetMasterBackColor() const

void x_Render(TAreaVector *p_areas)

TVPRect GetColumnRect(int i_col, bool include_header) const

virtual void Update(bool layout_only=false)

void SetMasterBackColor(const CRgbaColor Color)

virtual TVPRect GetRect() const

void SetupPaneForColumn(CGlPane &pane, int i_col) const

void SetResizableColumn(int index)

vector< CHTMLActiveArea > TAreaVector

TVPRect x_GetLineRect(int Index)

TColumnType GetColumnTypeByIndex(int i_col) const

int x_GetLineByWindowY(int WinY) const

int GetListTop() const

protected members

virtual void SetVPRect(const TVPRect &rc)

class CRgbaColor provides a simple abstraction for managing colors.

CRowDisplayStyle is a base class representing a display style for IAlignRow.

virtual const CRgbaColor & GetColor(TColorType type) const

bool IsWebRendering() const

CRuler is a renderable object drawing a scale with position labels.

void SetFont(CGlTextureFont::EFontFace font_type, unsigned int font_size=12)

virtual void SetVPRect(const TVPRect &rect)

TVPPoint GetPreferredSize(int max_num=0) const

void SetHorizontal(bool b_horz, ELabelPlacement place=eDefault, ELabelAlign aln=eAln_Center)

virtual void Render(CGlPane &pane)

static const string & GetName(CSeq_data::E_Choice code_type, TIndex idx)

static TIndex GetIndex(CSeq_data::E_Choice code_type, const string &code)

Interface IAlignRow - abstracts row rendering in Multiple Alignment Widget.

virtual string & GetColumnText(TColumnType col_type, string &text, bool for_printer=false) const =0

virtual string & GetAlnSeqString(string &buffer, const IAlnExplorer::TSignedRange &aln_rng) const =0

@ fWidgetFocused

it isn'e exactly a row state;

virtual int GetRowState() const =0

Returns row state (combination of EState flags)

virtual int GetHeightPixels() const =0

Returns height of the row in pixels.

virtual void Update(const CGlPane &pane, bool layout_only=false)

@ eIcons

Strand + Expand icons.

IAlnMultiRendererContext - this interface represents context in which CAlnMultiRenderer lives.

virtual IAlignRow * GetConsensusRow()=0

virtual int GetLineByRowNum(TNumrow row) const =0

virtual int GetShownElements()=0

virtual bool IsRendererFocused()=0

virtual const CGlPane & GetAlignPort() const =0

virtual int GetFocusedItemIndex() const =0

virtual IAlignRow * GetRowByLine(int index)=0

all Y coordinates are OpenGL Viewport coordinates (not widget coords) "index" is a line index (not ro...

virtual int GetLinePosY(int index) const =0

virtual int GetLineHeight(int index) const =0

@ fShownElement_MasterRow

@ fShownElement_Alignment

virtual IAlignRow * GetMasterRow()=0

virtual int GetLineByModelY(int y) const =0

virtual TNumrow GetLinesCount() const =0

container_type::iterator iterator

const_iterator begin() const

const_iterator end() const

static const struct name_t names[]

static DLIST_TYPE *DLIST_NAME() next(DLIST_LIST_TYPE *list, DLIST_TYPE *item)

static const column_t columns[]

unsigned int TSeqPos

Type for sequence locations and lengths.

#define ITERATE(Type, Var, Cont)

ITERATE macro to sequence through container elements.

#define NON_CONST_ITERATE(Type, Var, Cont)

Non constant version of ITERATE macro.

#define ERR_POST(message)

Error posting with file, line number information but without error codes.

const string & GetMsg(void) const

Get message string.

virtual const char * what(void) const noexcept

Standard report (includes full backlog).

void SetModelLimitsRect(const TModelRect &R)

void SetClipRect(const TVPRect *rc_clip=NULL)

set clipping rect that will be used by glScissor, NULL for reset

void SetViewport(const TVPRect &R)

virtual void Begin(GLenum mode)=0

Start rendering.

void Color3f(GLfloat r, GLfloat g, GLfloat b)

IRender & GetGl()

convenience function for getting current render manager

void Vertex2d(GLdouble x, GLdouble y)

TVPRect & GetViewport(void)

CGlRect< TVPUnit > TVPRect

TModelUnit UnProjectX(TVPUnit m_x) const

TModelRect & GetModelLimitsRect(void)

virtual void End()=0

Finish rendering (create buffer and send to renderer)

virtual void PolygonMode(GLenum face, GLenum mode)=0

Set the polygon rasterization mode.

void SetVert(T bottom, T top)

void SetVisibleRect(const TModelRect &R)

virtual TModelUnit GetMetric(EMetric metric, const char *text=NULL, int len=-1) const

TModelRect & GetVisibleRect(void)

void SetExactOrthoProjection(bool exact_projection)

void SetHorz(T left, T right)

virtual void ColorC(const CRgbaColor &c)=0

Set current color (glColor{3,4}{f,d}{v,})

void Rectd(GLdouble x1, GLdouble y1, GLdouble x2, GLdouble y2)

void EnableOffset(bool b_en=true)

Offset is used as a workaround for OpenGL precision problems emerging when size of visible range is s...

virtual void AddRow(const string &sContents="", unsigned colspan=2)=0

add a row with a cell, spanning across all columns

float GetBlue(void) const

float GetGreen(void) const

float GetAlpha(void) const

static CIRef< ITooltipFormatter > CreateTooltipFormatter()

float GetRed(void) const

Get specific channels in floating point values.

TRefType Lock(void) const

Lock the object and return reference to it.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

static string DoubleToString(double value, int precision=-1, TNumToStringFlags flags=0)

Convert double to string.

static string IntToString(int value, TNumToStringFlags flags=0, int base=10)

Convert int to string.

@ fWithCommas

Use commas as thousands separator.

static const char label[]

@ eSeq_code_type_iupacaa

IUPAC 1 letter amino acid code.

@ eSeq_code_type_iupacna

IUPAC 1 letter nuc acid code.

unsigned int

A callback function used to compare two keys in a database.

static void text(MDB_val *v)

constexpr bool empty(list< Ts... >) noexcept

The NCBI C++/STL use hints.

Defines: CTimeFormat - storage class for time format.

Int4 delta(size_t dimension_, const Int4 *score_)

static int match(PCRE2_SPTR start_eptr, PCRE2_SPTR start_ecode, uint16_t top_bracket, PCRE2_SIZE frame_size, pcre2_match_data *match_data, match_block *mb)

#define row(bind, expected)

SColumn describes a single column.

int m_Width

horizontal position in viewport

int m_UserData

width in pixels

bool m_Visible

can be used to identify column

static CS_CONTEXT * context

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