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NCBI C++ ToolKit: include/objtools/alnmgr/aln_container.hpp Source File

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list< CConstRef<CSeq_align> >

;

unordered_map<const CSeq_align*, TAlnSet::const_iterator>

;

const_iterator insert(const CSeq_align &seq_align)

Insert new CSeq_align into the list.

void UnsetSplitDisc(void)

TAlnSet::size_type size_type

void SetSplitDisc(void)

Enable/disable splitting disc alignments.

const_reverse_iterator rbegin(void) const

TAlnSet::const_iterator const_iterator

bool IsSetSplitDisc(void)

size_type size(void) const

list< CConstRef< CSeq_align > > TAlnSet

TAlnSet::const_reverse_iterator const_reverse_iterator

const_iterator end(void) const

unordered_map< const CSeq_align *, TAlnSet::const_iterator > m_AlnMap

const_iterator begin(void) const

virtual ~CAlnContainer(void)

const_reverse_iterator rend(void) const

Include a standard set of the NCBI C++ Toolkit most basic headers.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_XALNMGR_EXPORT

Portable reference counted smart and weak pointers using CWeakRef, CRef, CObject and CObjectEx.

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