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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/Variation__inst___8hpp_source.html below:

NCBI C++ ToolKit: include/objects/seqfeat/Variation_inst_.hpp Source File

41 #ifndef OBJECTS_SEQFEAT_VARIATION_INST_BASE_HPP 42 #define OBJECTS_SEQFEAT_VARIATION_INST_BASE_HPP 52 #ifndef BEGIN_objects_SCOPE 53 # define BEGIN_objects_SCOPE BEGIN_SCOPE(objects) 54 # define END_objects_SCOPE END_SCOPE(objects) 98

eType_microsatellite = 8,

101

eType_direct_copy = 11,

102

eType_rev_direct_copy = 12,

103

eType_inverted_copy = 13,

104

eType_everted_copy = 14,

105

eType_translocation = 15,

106

eType_prot_missense = 16,

107

eType_prot_nonsense = 17,

108

eType_prot_neutral = 18,

109

eType_prot_silent = 19,

110

eType_prot_other = 20,

121

eObservation_asserted = 1,

122

eObservation_reference = 2,

123

eObservation_variant = 4

131  typedef

list< CRef< CDelta_item > >

TDelta

;

153  bool

IsSetType(

void

)

const

;

160  bool

CanGetType(

void

)

const

;

163  void

ResetType(

void

);

169  TType

GetType(

void

)

const

;

181  TType

& SetType(

void

);

191  bool

IsSetDelta(

void

)

const

;

198  bool

CanGetDelta(

void

)

const

;

201  void

ResetDelta(

void

);

207  const TDelta

& GetDelta(

void

)

const

;

213  TDelta

& SetDelta(

void

);

222  bool

IsSetObservation(

void

)

const

;

229  bool

CanGetObservation(

void

)

const

;

232  void

ResetObservation(

void

);

253  virtual void

Reset(

void

);

Base class for all serializable objects.

static char UnassignedByte(void)

void ThrowUnassigned(TMemberIndex index) const

#define ENUM_METHOD_NAME(EnumName)

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_SEQFEAT_EXPORT

TType GetType(void) const

Get the Type member data.

DECLARE_INTERNAL_TYPE_INFO()

TObservation GetObservation(void) const

Get the Observation member data.

void ResetType(void)

Reset Type data member.

void ResetObservation(void)

Reset Observation data member.

bool IsSetDelta(void) const

Sequence that replaces the location, in biological order.

bool CanGetType(void) const

Check if it is safe to call GetType method.

const TDelta & GetDelta(void) const

Get the Delta member data.

CVariation_inst_Base(const CVariation_inst_Base &)

TObservation & SetObservation(void)

Assign a value to Observation data member.

list< CRef< CDelta_item > > m_Delta

bool CanGetDelta(void) const

Check if it is safe to call GetDelta method.

bool CanGetObservation(void) const

Check if it is safe to call GetObservation method.

Tparent::CMemberIndex< E_memberIndex, 4 > TmemberIndex

list< CRef< CDelta_item > > TDelta

bool IsSetType(void) const

Check if a value has been assigned to Type data member.

bool IsSetObservation(void) const

Check if a value has been assigned to Observation data member.

TType & SetType(void)

Assign a value to Type data member.

EObservation

'observation' is used to label items in a Variation-ref package This field is explicitly a bit-field,...

TDelta & SetDelta(void)

Assign a value to Delta data member.

CVariation_inst_Base & operator=(const CVariation_inst_Base &)

const GenericPointer< typename T::ValueType > T2 value


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