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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/VariationMethod___8hpp_source.html below:

NCBI C++ ToolKit: include/objects/variation/VariationMethod_.hpp Source File

41 #ifndef OBJECTS_VARIATION_VARIATIONMETHOD_BASE_HPP 42 #define OBJECTS_VARIATION_VARIATIONMETHOD_BASE_HPP 52 #ifndef BEGIN_objects_SCOPE 53 # define BEGIN_objects_SCOPE BEGIN_SCOPE(objects) 54 # define END_objects_SCOPE END_SCOPE(objects) 89

eMethod_E_unknown = 0,

90

eMethod_E_bac_acgh = 1,

91

eMethod_E_computational = 2,

92

eMethod_E_curated = 3,

93

eMethod_E_digital_array = 4,

94

eMethod_E_expression_array = 5,

96

eMethod_E_flanking_sequence = 7,

98

eMethod_E_mcd_analysis = 9,

100

eMethod_E_oea_assembly = 11,

101

eMethod_E_oligo_acgh = 12,

102

eMethod_E_paired_end = 13,

105

eMethod_E_read_depth = 16,

107

eMethod_E_rt_pcr = 18,

109

eMethod_E_sequence_alignment = 20,

110

eMethod_E_sequencing = 21,

111

eMethod_E_snp_array = 22,

112

eMethod_E_snp_genoytyping = 23,

113

eMethod_E_southern = 24,

114

eMethod_E_western = 25,

115

eMethod_E_optical_mapping = 26,

116

eMethod_E_other = 255

144 bool

IsSetMethod(

void

)

const

;

151 bool

CanGetMethod(

void

)

const

;

154 void

ResetMethod(

void

);

160 const TMethod

& GetMethod(

void

)

const

;

177 bool

IsSetReference_location(

void

)

const

;

184 bool

CanGetReference_location(

void

)

const

;

187 void

ResetReference_location(

void

);

208 virtual void

Reset(

void

);

Base class for all serializable objects.

CVariationMethod_Base â.

void ThrowUnassigned(TMemberIndex index) const

#define ENUM_METHOD_NAME(EnumName)

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_VARIATION_EXPORT

TMethod & SetMethod(void)

Assign a value to Method data member.

DECLARE_INTERNAL_TYPE_INFO()

CVariationMethod_Base & operator=(const CVariationMethod_Base &)

bool CanGetReference_location(void) const

Check if it is safe to call GetReference_location method.

const TReference_location & GetReference_location(void) const

Get the Reference_location member data.

bool IsSetMethod(void) const

Check if a value has been assigned to Method data member.

CRef< TReference_location > m_Reference_location

bool CanGetMethod(void) const

Check if it is safe to call GetMethod method.

CSeq_loc TReference_location

CVariationMethod_Base(const CVariationMethod_Base &)

bool IsSetReference_location(void) const

if sequence-based validation methods are used, what reference sequence location validated the presenc...

Tparent::CMemberIndex< E_memberIndex, 3 > TmemberIndex

const TMethod & GetMethod(void) const

Get the Method member data.

const GenericPointer< typename T::ValueType > T2 value

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