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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/Spliced__seg__modifier___8hpp_source.html below:

NCBI C++ ToolKit: include/objects/seqalign/Spliced_seg_modifier_.hpp Source File

Reset(

);

ResetSelection(

);

E_Choice Which(

)

;

CheckSelected(E_Choice index)

;

NCBI_NORETURN

ThrowInvalidSelection(E_Choice index)

;

SelectionName(E_Choice index);

IsStart_codon_found(

)

;

IsStop_codon_found(

)

;

*

sm_SelectionNames[];

Base class for all serializable objects.

CSpliced_seg_modifier_Base –.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_SEQALIGN_EXPORT

TStart_codon_found m_Start_codon_found

void Select(E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)

Select the requested variant if needed, allocating CObject variants from memory pool.

DECLARE_INTERNAL_TYPE_INFO()

E_Choice Which(void) const

Which variant is currently selected.

void ThrowInvalidSelection(E_Choice index) const

Throw 'InvalidSelection' exception.

TStop_codon_found m_Stop_codon_found

E_Choice

Choice variants.

TStart_codon_found & SetStart_codon_found(void)

Select the variant.

TStart_codon_found m_Start_codon_found

void Select(E_Choice index, EResetVariant reset=eDoResetVariant)

Select the requested variant if needed.

bool IsStop_codon_found(void) const

Check if variant Stop_codon_found is selected.

CSpliced_seg_modifier_Base & operator=(const CSpliced_seg_modifier_Base &)

E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

TStart_codon_found GetStart_codon_found(void) const

Get the variant data.

TStop_codon_found GetStop_codon_found(void) const

Get the variant data.

CSpliced_seg_modifier_Base(const CSpliced_seg_modifier_Base &)

TStop_codon_found m_Stop_codon_found

TStop_codon_found & SetStop_codon_found(void)

Select the variant.

void CheckSelected(E_Choice index) const

Verify selection, throw exception if it differs from the expected.

virtual void ResetSelection(void)

Reset the selection (set it to e_not_set).

bool IsStart_codon_found(void) const

Check if variant Start_codon_found is selected.

void DoSelect(E_Choice index, CObjectMemoryPool *pool=0)

@ e_Start_codon_found

protein aligns from the start and the first codon on both product and genomic is start codon

@ e_Stop_codon_found

protein aligns to it's end and there is stop codon on the genomic right after the alignment

@ e_not_set

No variant selected.

const GenericPointer< typename T::ValueType > T2 value

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