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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/Spectrum__query___8hpp_source.html below:

NCBI C++ ToolKit: include/algo/ms/formats/pepxml/Spectrum_query_.hpp Source File

e_retention_time_sec,

e_precursor_neutral_mass,

e_search_specification,

IsSetSpectrum(

)

;

CanGetSpectrum(

)

;

ResetSpectrum(

);

& GetSpectrum(

)

;

IsSetStart_scan(

)

;

CanGetStart_scan(

)

;

ResetStart_scan(

);

IsSetEnd_scan(

)

;

CanGetEnd_scan(

)

;

ResetEnd_scan(

);

IsSetRetention_time_sec(

)

;

CanGetRetention_time_sec(

)

;

ResetRetention_time_sec(

);

IsSetPrecursor_neutral_mass(

)

;

CanGetPrecursor_neutral_mass(

)

;

ResetPrecursor_neutral_mass(

);

IsSetAssumed_charge(

)

;

CanGetAssumed_charge(

)

;

ResetAssumed_charge(

);

IsSetSearch_specification(

)

;

CanGetSearch_specification(

)

;

ResetSearch_specification(

);

IsSetIndex(

)

;

CanGetIndex(

)

;

ResetIndex(

);

GetIndex(

)

;

& SetIndex(

);

IsSetAttlist(

)

;

CanGetAttlist(

)

;

ResetAttlist(

);

& GetAttlist(

)

;

IsSetSearch_result(

)

;

CanGetSearch_result(

)

;

ResetSearch_result(

);

Reset(

);

IsSetSpectrum();

(!CanGetSpectrum()) {

m_Spectrum = std::forward<CSpectrum_query_Base::C_Attlist::TSpectrum>(

);

(!IsSetSpectrum()) {

IsSetStart_scan();

(!CanGetStart_scan()) {

m_Start_scan =

;

(!IsSetStart_scan()) {

IsSetEnd_scan();

(!CanGetEnd_scan()) {

(!IsSetEnd_scan()) {

IsSetRetention_time_sec();

m_Retention_time_sec = 0;

(!CanGetRetention_time_sec()) {

m_Retention_time_sec;

m_Retention_time_sec =

;

(!IsSetRetention_time_sec()) {

memset(&m_Retention_time_sec,

(),

(m_Retention_time_sec));

m_Retention_time_sec;

IsSetPrecursor_neutral_mass();

m_Precursor_neutral_mass = 0;

(!CanGetPrecursor_neutral_mass()) {

m_Precursor_neutral_mass;

m_Precursor_neutral_mass =

;

(!IsSetPrecursor_neutral_mass()) {

memset(&m_Precursor_neutral_mass,

(),

(m_Precursor_neutral_mass));

m_Precursor_neutral_mass;

IsSetAssumed_charge();

m_Assumed_charge = 0;

(!CanGetAssumed_charge()) {

m_Assumed_charge;

m_Assumed_charge =

;

(!IsSetAssumed_charge()) {

memset(&m_Assumed_charge,

(),

(m_Assumed_charge));

m_Assumed_charge;

IsSetSearch_specification();

(!CanGetSearch_specification()) {

m_Search_specification;

m_Search_specification =

;

m_Search_specification = std::forward<CSpectrum_query_Base::C_Attlist::TSearch_specification>(

);

(!IsSetSearch_specification()) {

m_Search_specification;

(!CanGetIndex()) {

Base class for all serializable objects.

MS/MS spectrum, precursor ion charge and mass.

static char UnassignedByte(void)

void ThrowUnassigned(TMemberIndex index) const

static string UnassignedString(void)

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_PEPXML_EXPORT

TEnd_scan & SetEnd_scan(void)

Assign a value to End_scan data member.

double m_Retention_time_sec

bool IsSetSearch_specification(void) const

Check if a value has been assigned to Search_specification data member.

bool CanGetAssumed_charge(void) const

Check if it is safe to call GetAssumed_charge method.

void ResetEnd_scan(void)

Reset End_scan data member.

bool CanGetPrecursor_neutral_mass(void) const

Check if it is safe to call GetPrecursor_neutral_mass method.

bool IsSetAssumed_charge(void) const

Check if a value has been assigned to Assumed_charge data member.

const TSpectrum & GetSpectrum(void) const

Get the Spectrum member data.

bool IsSetIndex(void) const

Check if a value has been assigned to Index data member.

TStart_scan GetStart_scan(void) const

Get the Start_scan member data.

C_Attlist(const C_Attlist &)

bool CanGetSpectrum(void) const

Check if it is safe to call GetSpectrum method.

TIndex GetIndex(void) const

Get the Index member data.

TPrecursor_neutral_mass & SetPrecursor_neutral_mass(void)

Assign a value to Precursor_neutral_mass data member.

bool CanGetSearch_specification(void) const

Check if it is safe to call GetSearch_specification method.

Tparent::CMemberIndex< E_memberIndex, 3 > TmemberIndex

bool IsSetSearch_result(void) const

Check if a value has been assigned to Search_result data member.

bool IsSetAttlist(void) const

Check if a value has been assigned to Attlist data member.

const TAttlist & GetAttlist(void) const

Get the Attlist member data.

string m_Search_specification

TRetention_time_sec & SetRetention_time_sec(void)

Assign a value to Retention_time_sec data member.

C_Attlist & operator=(const C_Attlist &)

void ResetPrecursor_neutral_mass(void)

Reset Precursor_neutral_mass data member.

bool CanGetIndex(void) const

Check if it is safe to call GetIndex method.

void ResetAssumed_charge(void)

Reset Assumed_charge data member.

bool CanGetEnd_scan(void) const

Check if it is safe to call GetEnd_scan method.

TIndex & SetIndex(void)

Assign a value to Index data member.

DECLARE_INTERNAL_TYPE_INFO()

TSpectrum & SetSpectrum(void)

Assign a value to Spectrum data member.

bool CanGetSearch_result(void) const

Check if it is safe to call GetSearch_result method.

Tparent::CMemberIndex< E_memberIndex, 9 > TmemberIndex

string TSearch_specification

TSearch_specification & SetSearch_specification(void)

Assign a value to Search_specification data member.

CRef< TAttlist > m_Attlist

double m_Precursor_neutral_mass

const TSearch_result & GetSearch_result(void) const

Get the Search_result member data.

double TPrecursor_neutral_mass

double TRetention_time_sec

TAssumed_charge & SetAssumed_charge(void)

Assign a value to Assumed_charge data member.

CSpectrum_query_Base(const CSpectrum_query_Base &)

TPrecursor_neutral_mass GetPrecursor_neutral_mass(void) const

Get the Precursor_neutral_mass member data.

TAssumed_charge GetAssumed_charge(void) const

Get the Assumed_charge member data.

bool IsSetStart_scan(void) const

Check if a value has been assigned to Start_scan data member.

bool CanGetStart_scan(void) const

Check if it is safe to call GetStart_scan method.

bool IsSetSpectrum(void) const

Check if a value has been assigned to Spectrum data member.

bool IsSetRetention_time_sec(void) const

Check if a value has been assigned to Retention_time_sec data member.

void ResetRetention_time_sec(void)

Reset Retention_time_sec data member.

list< CRef< CSearch_result > > m_Search_result

bool IsSetPrecursor_neutral_mass(void) const

Check if a value has been assigned to Precursor_neutral_mass data member.

TRetention_time_sec GetRetention_time_sec(void) const

Get the Retention_time_sec member data.

bool IsSetEnd_scan(void) const

Check if a value has been assigned to End_scan data member.

void ResetIndex(void)

Reset Index data member.

list< CRef< CSearch_result > > TSearch_result

void ResetStart_scan(void)

Reset Start_scan data member.

const TSearch_specification & GetSearch_specification(void) const

Get the Search_specification member data.

DECLARE_INTERNAL_TYPE_INFO()

TStart_scan & SetStart_scan(void)

Assign a value to Start_scan data member.

CSpectrum_query_Base & operator=(const CSpectrum_query_Base &)

bool CanGetRetention_time_sec(void) const

Check if it is safe to call GetRetention_time_sec method.

bool CanGetAttlist(void) const

Check if it is safe to call GetAttlist method.

TSearch_result & SetSearch_result(void)

Assign a value to Search_result data member.

TAttlist & SetAttlist(void)

Assign a value to Attlist data member.

TEnd_scan GetEnd_scan(void) const

Get the End_scan member data.

void ResetAttlist(void)

Reset Attlist data member.

const GenericPointer< typename T::ValueType > T2 value

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