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NCBI C++ ToolKit: src/objects/seqalign/Sparse_align.cpp Source File

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User-defined methods of the data storage class.

TNumseg CheckNumSegs(void) const

TDim CheckNumRows(void) const

void Validate(bool full_test=false) const

Validators.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

const TSeg_scores & GetSeg_scores(void) const

Get the Seg_scores member data.

bool IsSetSeg_scores(void) const

per-segment scores Check if a value has been assigned to Seg_scores data member.

const TSecond_starts & GetSecond_starts(void) const

Get the Second_starts member data.

const TLens & GetLens(void) const

Get the Lens member data.

bool IsSetSecond_strands(void) const

Check if a value has been assigned to Second_strands data member.

const TFirst_starts & GetFirst_starts(void) const

Get the First_starts member data.

TNumseg GetNumseg(void) const

Get the Numseg member data.

const TSecond_strands & GetSecond_strands(void) const

Get the Second_strands member data.

const struct ncbi::grid::netcache::search::fields::SIZE size

#define _SEQALIGN_ASSERT(expr)

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