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NCBI C++ ToolKit: include/objects/scoremat/Site_annot_.hpp Source File

IsSetStartPosition(

)

;

CanGetStartPosition(

)

;

ResetStartPosition(

);

IsSetStopPosition(

)

;

CanGetStopPosition(

)

;

ResetStopPosition(

);

IsSetDescription(

)

;

CanGetDescription(

)

;

ResetDescription(

);

IsSetType(

)

;

CanGetType(

)

;

ResetType(

);

GetType(

)

;

& SetType(

);

IsSetAliases(

)

;

CanGetAliases(

)

;

ResetAliases(

);

& GetAliases(

)

;

IsSetMotif(

)

;

CanGetMotif(

)

;

ResetMotif(

);

& GetMotif(

)

;

& SetMotif(

);

IsSetMotifuse(

)

;

CanGetMotifuse(

)

;

ResetMotifuse(

);

Reset(

);

= std::forward<CSite_annot_Base::TMotif>(

);

Base class for all serializable objects.

static char UnassignedByte(void)

void ThrowUnassigned(TMemberIndex index) const

static string UnassignedString(void)

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_SCOREMAT_EXPORT

bool IsSetAliases(void) const

additional names for the annotation Check if a value has been assigned to Aliases data member.

Tparent::CMemberIndex< E_memberIndex, 8 > TmemberIndex

bool IsSetStartPosition(void) const

location of the annotation, Check if a value has been assigned to StartPosition data member.

bool CanGetMotifuse(void) const

Check if it is safe to call GetMotifuse method.

bool IsSetStopPosition(void) const

start and stop position in the PSSM Check if a value has been assigned to StopPosition data member.

bool IsSetType(void) const

type of the annotated feature, similarly to Align-annot in NCBI-Cdd Check if a value has been assigne...

TStartPosition GetStartPosition(void) const

Get the StartPosition member data.

bool CanGetDescription(void) const

Check if it is safe to call GetDescription method.

TDescription & SetDescription(void)

Assign a value to Description data member.

bool IsSetMotifuse(void) const

0 for validation 1 for motif in seqloc 2 for multiple motifs in seqloc Check if a value has been assi...

bool CanGetAliases(void) const

Check if it is safe to call GetAliases method.

void ResetMotifuse(void)

Reset Motifuse data member.

const TMotif & GetMotif(void) const

Get the Motif member data.

TStopPosition GetStopPosition(void) const

Get the StopPosition member data.

bool CanGetStopPosition(void) const

Check if it is safe to call GetStopPosition method.

CSite_annot_Base & operator=(const CSite_annot_Base &)

void ResetStopPosition(void)

Reset StopPosition data member.

CSite_annot_Base(const CSite_annot_Base &)

bool IsSetDescription(void) const

holds description or names, that can be used for labels in visualization Check if a value has been as...

const TDescription & GetDescription(void) const

Get the Description member data.

TStartPosition & SetStartPosition(void)

Assign a value to StartPosition data member.

TStopPosition & SetStopPosition(void)

Assign a value to StopPosition data member.

TMotif & SetMotif(void)

Assign a value to Motif data member.

TMotifuse & SetMotifuse(void)

Assign a value to Motifuse data member.

void ResetType(void)

Reset Type data member.

bool CanGetStartPosition(void) const

Check if it is safe to call GetStartPosition method.

bool IsSetMotif(void) const

motif to validate mapping of sites Check if a value has been assigned to Motif data member.

TAliases & SetAliases(void)

Assign a value to Aliases data member.

TType GetType(void) const

Get the Type member data.

const TAliases & GetAliases(void) const

Get the Aliases member data.

TMotifuse GetMotifuse(void) const

Get the Motifuse member data.

bool CanGetType(void) const

Check if it is safe to call GetType method.

DECLARE_INTERNAL_TYPE_INFO()

bool CanGetMotif(void) const

Check if it is safe to call GetMotif method.

TType & SetType(void)

Assign a value to Type data member.

void ResetStartPosition(void)

Reset StartPosition data member.

const GenericPointer< typename T::ValueType > T2 value

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