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ENa_strand Reverse(ENa_strand s)
ESeqLocExtremes
Used to determine the meaning of a location's Start/Stop positions.
@ eExtreme_Biological
5' and 3'
void SetRightOf(bool val)
bool IsPartialStart(ESeqLocExtremes ext) const
bool x_IsMinusStrand(void) const
void SetTruncatedStart(bool val, ESeqLocExtremes ext)
set / remove e_Lim fuzz on start or stop (tl/tr - indicating removed parts of the seq-loc)
bool IsTruncatedStop(ESeqLocExtremes ext) const
bool IsRightOf(void) const
bool IsPartialStop(ESeqLocExtremes ext) const
bool IsLeftOf(void) const
bool IsTruncatedStart(ESeqLocExtremes ext) const
check if parts of the seq-loc are missing
void SetPartialStart(bool val, ESeqLocExtremes ext)
void SetTruncatedStop(bool val, ESeqLocExtremes ext)
void SetPartialStop(bool val, ESeqLocExtremes ext)
#define END_NCBI_SCOPE
End previously defined NCBI scope.
#define BEGIN_NCBI_SCOPE
Define ncbi namespace.
bool IsLim(void) const
Check if variant Lim is selected.
TLim GetLim(void) const
Get the variant data.
TLim & SetLim(void)
Select the variant.
@ eLim_tl
space to left of position
@ eLim_tr
space to right of position
TStrand & SetStrand(void)
Assign a value to Strand data member.
ENa_strand
strand of nucleic acid
bool IsSetFuzz(void) const
Check if a value has been assigned to Fuzz data member.
const TFuzz & GetFuzz(void) const
Get the Fuzz member data.
void ResetFuzz(void)
Reset Fuzz data member.
TStrand GetStrand(void) const
Get the Strand member data.
bool IsSetStrand(void) const
Check if a value has been assigned to Strand data member.
TFuzz & SetFuzz(void)
Assign a value to Fuzz data member.
@ eNa_strand_both_rev
in reverse orientation
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