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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/Seq__point_8cpp_source.html below:

NCBI C++ ToolKit: src/objects/seqloc/Seq_point.cpp Source File

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ENa_strand Reverse(ENa_strand s)

ESeqLocExtremes

Used to determine the meaning of a location's Start/Stop positions.

@ eExtreme_Biological

5' and 3'

void SetRightOf(bool val)

bool IsPartialStart(ESeqLocExtremes ext) const

bool x_IsMinusStrand(void) const

void SetTruncatedStart(bool val, ESeqLocExtremes ext)

set / remove e_Lim fuzz on start or stop (tl/tr - indicating removed parts of the seq-loc)

bool IsTruncatedStop(ESeqLocExtremes ext) const

bool IsRightOf(void) const

bool IsPartialStop(ESeqLocExtremes ext) const

bool IsLeftOf(void) const

bool IsTruncatedStart(ESeqLocExtremes ext) const

check if parts of the seq-loc are missing

void SetPartialStart(bool val, ESeqLocExtremes ext)

void SetTruncatedStop(bool val, ESeqLocExtremes ext)

void SetPartialStop(bool val, ESeqLocExtremes ext)

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

bool IsLim(void) const

Check if variant Lim is selected.

TLim GetLim(void) const

Get the variant data.

TLim & SetLim(void)

Select the variant.

@ eLim_tl

space to left of position

@ eLim_tr

space to right of position

TStrand & SetStrand(void)

Assign a value to Strand data member.

ENa_strand

strand of nucleic acid

bool IsSetFuzz(void) const

Check if a value has been assigned to Fuzz data member.

const TFuzz & GetFuzz(void) const

Get the Fuzz member data.

void ResetFuzz(void)

Reset Fuzz data member.

TStrand GetStrand(void) const

Get the Strand member data.

bool IsSetStrand(void) const

Check if a value has been assigned to Strand data member.

TFuzz & SetFuzz(void)

Assign a value to Fuzz data member.

@ eNa_strand_both_rev

in reverse orientation


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