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NCBI C++ ToolKit: include/objects/seqres/Seq_graph_.hpp Source File

ResetSelection(

);

E_Choice Which(

)

;

CheckSelected(E_Choice index)

;

NCBI_NORETURN

ThrowInvalidSelection(E_Choice index)

;

SelectionName(E_Choice index);

IsReal(

)

;

& GetReal(

)

;

& SetReal(

);

IsInt(

)

;

& GetInt(

)

;

& SetInt(

);

IsByte(

)

;

& GetByte(

)

;

& SetByte(

);

*

sm_SelectionNames[];

IsSetTitle(

)

;

CanGetTitle(

)

;

ResetTitle(

);

IsSetComment(

)

;

CanGetComment(

)

;

ResetComment(

);

& GetComment(

)

;

IsSetLoc(

)

;

CanGetLoc(

)

;

ResetLoc(

);

& SetLoc(

);

IsSetTitle_x(

)

;

CanGetTitle_x(

)

;

ResetTitle_x(

);

& GetTitle_x(

)

;

IsSetTitle_y(

)

;

CanGetTitle_y(

)

;

ResetTitle_y(

);

& GetTitle_y(

)

;

IsSetComp(

)

;

CanGetComp(

)

;

ResetComp(

);

GetComp(

)

;

& SetComp(

);

IsSetA(

)

;

CanGetA(

)

;

GetA(

)

;

IsSetB(

)

;

CanGetB(

)

;

GetB(

)

;

IsSetNumval(

)

;

CanGetNumval(

)

;

ResetNumval(

);

GetNumval(

)

;

IsSetGraph(

)

;

CanGetGraph(

)

;

ResetGraph(

);

& GetGraph(

)

;

& SetGraph(

);

Reset(

);

( m_choice != index )

ThrowInvalidSelection(index);

DoSelect(index, pool);

Select(index, reset, 0);

m_choice == e_Real;

m_choice == e_Int;

m_choice == e_Byte;

= std::forward<CSeq_graph_Base::TTitle>(

);

.NotEmpty();

*** Sequence Graph ******************************** * * for values mapped by residue or range to sequ...

Base class for all serializable objects.

unsigned int TSeqPos

Type for sequence locations and lengths.

static char UnassignedByte(void)

void ThrowUnassigned(TMemberIndex index) const

static string UnassignedString(void)

NCBI_XOBJUTIL_EXPORT string GetTitle(const CBioseq_Handle &hnd, TGetTitleFlags flags=0)

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_SEQRES_EXPORT

bool CanGetComp(void) const

Check if it is safe to call GetComp method.

bool IsSetNumval(void) const

number of values in graph Check if a value has been assigned to Numval data member.

bool IsSetComp(void) const

compression (residues/value) Check if a value has been assigned to Comp data member.

bool CanGetTitle_y(void) const

Check if it is safe to call GetTitle_y method.

bool IsSetB(void) const

display = (a x value) + b Check if a value has been assigned to B data member.

bool IsSetLoc(void) const

region this applies to Check if a value has been assigned to Loc data member.

TTitle_y & SetTitle_y(void)

Assign a value to Title_y data member.

bool CanGetNumval(void) const

Check if it is safe to call GetNumval method.

bool CanGetComment(void) const

Check if it is safe to call GetComment method.

TLoc & SetLoc(void)

Assign a value to Loc data member.

E_Choice

Choice variants.

bool IsSetComment(void) const

Check if a value has been assigned to Comment data member.

void ResetA(void)

Reset A data member.

bool CanGetA(void) const

Check if it is safe to call GetA method.

E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

bool IsSetA(void) const

for scaling values Check if a value has been assigned to A data member.

const TGraph & GetGraph(void) const

Get the Graph member data.

const TTitle & GetTitle(void) const

Get the Title member data.

bool CanGetTitle(void) const

Check if it is safe to call GetTitle method.

bool IsInt(void) const

Check if variant Int is selected.

bool CanGetTitle_x(void) const

Check if it is safe to call GetTitle_x method.

TB GetB(void) const

Get the B member data.

TTitle & SetTitle(void)

Assign a value to Title data member.

const TTitle_x & GetTitle_x(void) const

Get the Title_x member data.

void Select(E_Choice index, EResetVariant reset=eDoResetVariant)

Select the requested variant if needed.

bool CanGetLoc(void) const

Check if it is safe to call GetLoc method.

const TTitle_y & GetTitle_y(void) const

Get the Title_y member data.

void CheckSelected(E_Choice index) const

Verify selection, throw exception if it differs from the expected.

bool IsReal(void) const

Check if variant Real is selected.

TA & SetA(void)

Assign a value to A data member.

TTitle_x & SetTitle_x(void)

Assign a value to Title_x data member.

void ResetLoc(void)

Reset Loc data member.

C_Graph & operator=(const C_Graph &)

TComp & SetComp(void)

Assign a value to Comp data member.

TComment & SetComment(void)

Assign a value to Comment data member.

bool CanGetGraph(void) const

Check if it is safe to call GetGraph method.

bool IsByte(void) const

Check if variant Byte is selected.

E_Choice Which(void) const

Which variant is currently selected.

void Select(E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)

Select the requested variant if needed, allocating CObject variants from memory pool.

DECLARE_INTERNAL_TYPE_INFO()

void ResetNumval(void)

Reset Numval data member.

TB & SetB(void)

Assign a value to B data member.

bool CanGetB(void) const

Check if it is safe to call GetB method.

void ResetComp(void)

Reset Comp data member.

TGraph & SetGraph(void)

Assign a value to Graph data member.

const TLoc & GetLoc(void) const

Get the Loc member data.

TNumval GetNumval(void) const

Get the Numval member data.

Tparent::CMemberIndex< E_memberIndex, 11 > TmemberIndex

TA GetA(void) const

Get the A member data.

bool IsSetTitle(void) const

Check if a value has been assigned to Title data member.

bool IsSetTitle_x(void) const

title for x-axis Check if a value has been assigned to Title_x data member.

bool IsSetGraph(void) const

Check if a value has been assigned to Graph data member.

const TComment & GetComment(void) const

Get the Comment member data.

CSeq_graph_Base(const CSeq_graph_Base &)

DECLARE_INTERNAL_TYPE_INFO()

TNumval & SetNumval(void)

Assign a value to Numval data member.

void ResetGraph(void)

Reset Graph data member.

void ResetB(void)

Reset B data member.

bool IsSetTitle_y(void) const

Check if a value has been assigned to Title_y data member.

TComp GetComp(void) const

Get the Comp member data.

CSeq_graph_Base & operator=(const CSeq_graph_Base &)

NCBI_NS_NCBI::CSerialObject * m_object

const GenericPointer< typename T::ValueType > T2 value

int GetLoc(const string &acc, const string &pat, CSeq_loc &loc, CScope &scope)

static void SetTitle(CRef< CSeq_entry > entry, string title)

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