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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/Seq__data___8cpp_source.html below:

NCBI C++ ToolKit: src/objects/seq/Seq_data_.cpp Source File

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

BEGIN_NAMED_BASE_CHOICE_INFO("Seq-data", CSeq_data)

User-defined methods of the data storage class.

#define DIAG_COMPILE_INFO

Make compile time diagnostic information object to use in CNcbiDiag and CException.

#define ADD_NAMED_REF_CHOICE_VARIANT(MemberAlias, MemberName, ClassName)

#define SET_CHOICE_MODULE(ModuleName)

#define ADD_NAMED_BUF_CHOICE_VARIANT(MemberAlias, MemberName, TypeMacro, TypeMacroArgs)

void AddReference(void) const

Add reference to object.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

NCBI_NS_NCBI::CSerialObject * m_object

NCBI_NS_NCBI::CUnionBuffer< TNcbipna > m_Ncbipna

void ThrowInvalidSelection(E_Choice index) const

Throw 'InvalidSelection' exception.

static const char *const sm_SelectionNames[]

NCBI_NS_NCBI::CUnionBuffer< TNcbi8na > m_Ncbi8na

const TGap & GetGap(void) const

Get the variant data.

virtual void ResetSelection(void)

Reset the selection (set it to e_not_set).

TNcbieaa & SetNcbieaa(void)

Select the variant.

E_Choice

Choice variants.

TIupacna & SetIupacna(void)

Select the variant.

NCBI_NS_NCBI::CUnionBuffer< TNcbi8aa > m_Ncbi8aa

static string SelectionName(E_Choice index)

Retrieve selection name (for diagnostic purposes).

NCBI_NS_NCBI::CUnionBuffer< TIupacna > m_Iupacna

NCBI_NS_NCBI::CUnionBuffer< TNcbi2na > m_Ncbi2na

void Select(E_Choice index, EResetVariant reset=eDoResetVariant)

Select the requested variant if needed.

NCBI_NS_NCBI::CUnionBuffer< TNcbi4na > m_Ncbi4na

void CheckSelected(E_Choice index) const

Verify selection, throw exception if it differs from the expected.

NCBI_NS_NCBI::CUnionBuffer< TNcbistdaa > m_Ncbistdaa

NCBI_NS_NCBI::CUnionBuffer< TNcbipaa > m_Ncbipaa

virtual ~CSeq_data_Base(void)

TGap & SetGap(void)

Select the variant.

NCBI_NS_NCBI::CUnionBuffer< TIupacaa > m_Iupacaa

TIupacaa & SetIupacaa(void)

Select the variant.

NCBI_NS_NCBI::CUnionBuffer< TNcbieaa > m_Ncbieaa

void DoSelect(E_Choice index, CObjectMemoryPool *pool=0)

virtual void Reset(void)

Reset the whole object.

@ e_not_set

No variant selected.

@ e_Ncbipna

nucleic acid probabilities

@ e_Ncbieaa

extended ASCII 1 letter aa codes

@ e_Ncbistdaa

consecutive codes for std aas

@ e_Ncbi2na

2 bit nucleic acid code

@ e_Iupacna

IUPAC 1 letter nuc acid code.

@ e_Ncbipaa

amino acid probabilities

@ e_Ncbi8na

8 bit extended nucleic acid code

@ e_Ncbi4na

4 bit nucleic acid code

@ e_Iupacaa

IUPAC 1 letter amino acid code.

@ e_Ncbi8aa

8 bit extended amino acid codes

const GenericPointer< typename T::ValueType > T2 value

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