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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/Seq__code__type___8hpp_source.html below:

NCBI C++ ToolKit: include/objects/seqcode/Seq_code_type_.hpp Source File

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41 #ifndef OBJECTS_SEQCODE_SEQ_CODE_TYPE_BASE_HPP 42 #define OBJECTS_SEQCODE_SEQ_CODE_TYPE_BASE_HPP 48 #ifndef BEGIN_objects_SCOPE 49 # define BEGIN_objects_SCOPE BEGIN_SCOPE(objects) 50 # define END_objects_SCOPE END_SCOPE(objects)

#define ENUM_METHOD_NAME(EnumName)

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_SEQCODE_EXPORT

ESeq_code_type

sequence representations

@ eSeq_code_type_ncbi2na

2 bit nucleic acid code

@ eSeq_code_type_ncbistdaa

consecutive codes for std aas, 0-25

@ eSeq_code_type_ncbi4na

4 bit nucleic acid code

@ eSeq_code_type_ncbieaa

extended ASCII 1 letter aa codes

@ eSeq_code_type_ncbipaa

amino acid probabilities

@ eSeq_code_type_ncbi8aa

8 bit extended amino acid codes

@ eSeq_code_type_ncbi8na

8 bit extended nucleic acid code

@ eSeq_code_type_ncbipna

nucleic acid probabilities

@ eSeq_code_type_iupacaa3

3 letter code only for display

@ eSeq_code_type_iupacaa

IUPAC 1 letter amino acid code.

@ eSeq_code_type_iupacna

IUPAC 1 letter nuc acid code.


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