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NCBI C++ ToolKit: src/objects/seqtable/SeqTable_column.cpp Source File

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User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

const vector< char > * GetBytesPtr(size_t row) const

CConstRef< CSeq_interval > GetSeq_int(size_t row) const

const string * GetStringPtr(size_t row) const

CConstRef< CSeq_id > GetSeq_id(size_t row) const

CConstRef< CSeq_loc > GetSeq_loc(size_t row) const

bool IsSet(size_t row) const

static const size_t kSkipped

size_t GetIndexAt(size_t row) const

static vector< string > arr

const CSeq_id & GetId(const CSeq_loc &loc, CScope *scope)

If all CSeq_ids embedded in CSeq_loc refer to the same CBioseq, returns the first CSeq_id found,...

CConstRef< C > ConstRef(const C *object)

Template function for conversion of const object pointer to CConstRef.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

const TDefault & GetDefault(void) const

Get the Default member data.

const TSparse_other & GetSparse_other(void) const

Get the Sparse_other member data.

const TSparse & GetSparse(void) const

Get the Sparse member data.

const TString & GetString(void) const

Get the variant data.

const TInterval & GetInterval(void) const

Get the variant data.

bool IsSetSparse_other(void) const

single value for indexes not listed in sparse table Check if a value has been assigned to Sparse_othe...

vector< CRef< CSeq_loc > > TLoc

const TLoc & GetLoc(void) const

Get the variant data.

vector< CRef< CSeq_id > > TId

bool IsSetData(void) const

row data Check if a value has been assigned to Data data member.

bool IsSetSparse(void) const

in case not all rows contain data this field will contain sparse info Check if a value has been assig...

const TBytes & GetBytes(void) const

Get the variant data.

vector< CRef< CSeq_interval > > TInterval

const TData & GetData(void) const

Get the Data member data.

bool IsSetDefault(void) const

default value for sparse table, or if row data is too short Check if a value has been assigned to Def...

const TId & GetId(void) const

Get the variant data.

int GetLoc(const string &acc, const string &pat, CSeq_loc &loc, CScope &scope)

#define row(bind, expected)

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