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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/Search__hit___8cpp_source.html below:

NCBI C++ ToolKit: src/algo/ms/formats/pepxml/Search_hit_.cpp Source File

m_Peptide_prev_aa.erase();

m_Peptide_next_aa.erase();

m_Protein_descr.erase();

ResetPeptide_prev_aa();

ResetPeptide_next_aa();

ResetNum_tot_proteins();

ResetNum_matched_ions();

ResetCalc_neutral_pep_mass();

ResetNum_missed_cleavages();

ResetProtein_descr();

(

, m_Is_rejected, EAttlist_is_rejected)->SetDefault(

TIs_rejected(eAttlist_is_rejected_0))->SetSetFlag(

(

[0]))->SetOptional()->SetNsQualified(

);

->SetRandomOrder(

);

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eXSD);

: m_Hit_rank(0), m_Num_tot_proteins(0), m_Num_matched_ions(0), m_Tot_num_ions(0), m_Calc_neutral_pep_mass(0), m_Num_tol_term(0), m_Num_missed_cleavages(0), m_Is_rejected(eAttlist_is_rejected_0), m_Protein_mw(0)

(*m_Attlist).Reset();

(

)->SetNsQualified(

);

->RandomOrder();

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eXSD);

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

BEGIN_NAMED_ENUM_IN_INFO("", CSearch_hit_Base::C_Attlist::, EAttlist_is_rejected, false)

BEGIN_NAMED_BASE_CLASS_INFO("search_hit", CSearch_hit)

BEGIN_NAMED_CLASS_INFO("", CSearch_hit_Base::C_Attlist)

User-defined methods of the data storage class.

CAlternative_protein –.

#define MEMBER_PTR(MemberName)

#define SET_ENUM_INTERNAL_NAME(OwnerName, MemberName)

#define ADD_NAMED_MEMBER(MemberAlias, MemberName, TypeMacro, TypeMacroArgs)

#define ADD_NAMED_REF_MEMBER(MemberAlias, MemberName, ClassName)

#define SET_ENUM_MODULE(ModuleName)

#define ADD_NAMED_STD_MEMBER(MemberAlias, MemberName)

#define SET_CLASS_MODULE(ModuleName)

#define SET_NAMESPACE(name)

#define ADD_NAMED_ENUM_MEMBER(MemberAlias, MemberName, EnumName)

#define ADD_ENUM_VALUE(EnumValueName, EnumValueValue)

#define SET_INTERNAL_NAME(OwnerName, MemberName)

bool IsAllocatedInPool(void) const THROWS_NONE

Check if object is allocated in memory pool (not system heap)

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

list< CRef< CParameter > > m_Parameter

void ResetAlternative_protein(void)

Reset Alternative_protein data member.

list< CRef< CAnalysis_result > > m_Analysis_result

void ResetSearch_score(void)

Reset Search_score data member.

void ResetProtein(void)

Reset Protein data member.

void ResetProtein_descr(void)

Reset Protein_descr data member.

void ResetAttlist(void)

Reset Attlist data member.

void ResetMassdiff(void)

Reset Massdiff data member.

CModification_info TModification_info

void ResetParameter(void)

Reset Parameter data member.

TAttlist & SetAttlist(void)

Assign a value to Attlist data member.

void ResetCalc_pI(void)

Reset Calc_pI data member.

list< CRef< CSearch_score > > m_Search_score

void ResetModification_info(void)

Reset Modification_info data member.

void ResetPeptide_next_aa(void)

Reset Peptide_next_aa data member.

void ResetPeptide(void)

Reset Peptide data member.

virtual ~CSearch_hit_Base(void)

CRef< TModification_info > m_Modification_info

list< CRef< CAlternative_protein > > m_Alternative_protein

TModification_info & SetModification_info(void)

Assign a value to Modification_info data member.

virtual void Reset(void)

Reset the whole object.

CRef< TAttlist > m_Attlist

void ResetPeptide_prev_aa(void)

Reset Peptide_prev_aa data member.

void Reset(void)

Reset the whole object.

void ResetAnalysis_result(void)

Reset Analysis_result data member.

const GenericPointer< typename T::ValueType > T2 value

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