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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/Rs___8cpp_source.html below:

NCBI C++ ToolKit: src/objects/docsum/Rs_.cpp Source File

(

, eAttlist_snpClass_microsatellite);

(

, eAttlist_snpClass_multinucleotide_polymorphism);

(

, eAttlist_snpType_gene_duplication);

(

, eAttlist_snpType_duplicate_submission);

(

, eAttlist_snpType_ambiguous_location);

(

, eAttlist_snpType_low_map_quality);

->SetRandomOrder(

);

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

->SetRandomOrder(

);

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

(*m_Attlist).Reset();

->RandomOrder();

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

ResetBy2Hit2Allele();

->SetRandomOrder(

);

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

: m_ByCluster(0), m_ByFrequency(0), m_ByOtherPop(0), m_By2Hit2Allele(0), m_ByHapMap(0), m_By1000G(0), m_Suspect(0)

(*m_Attlist).Reset();

->RandomOrder();

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

->SetRandomOrder(

);

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

(*m_Attlist).Reset();

->RandomOrder();

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

->SetRandomOrder(

);

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

(*m_Attlist).Reset();

->RandomOrder();

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

m_AncestralAllele.erase();

ResetAncestralAllele();

->SetRandomOrder(

);

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

(*m_Attlist).Reset();

->RandomOrder();

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

->SetRandomOrder(

);

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

: m_RsId(0), m_BuildId(0), m_OrientFlip(0)

(*m_Attlist).Reset();

->RandomOrder();

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

->SetRandomOrder(

);

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

(*m_Attlist).Reset();

->RandomOrder();

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

m_ClinicalSignificance.clear();

ResetClinicalSignificance();

->RandomOrder();

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

->RandomOrder();

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

->SetRandomOrder(

);

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

: m_Freq(0), m_PopId(0), m_SampleSize(0)

(*m_Attlist).Reset();

->RandomOrder();

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

(*m_Attlist).Reset();

(*m_Validation).Reset();

(*m_Create).Reset();

(*m_Sequence).Reset();

->RandomOrder();

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

BEGIN_NAMED_ENUM_IN_INFO("", CRs_Base::C_Attlist::, EAttlist_snpClass, false)

BEGIN_NAMED_CLASS_INFO("", CRs_Base::C_Attlist)

BEGIN_NAMED_BASE_CLASS_INFO("Rs", CRs)

User-defined methods of the data storage class.

date the refsnp cluster was instantiated date the refsnp cluster was instantiated

most recent date the cluster was updated (member added or deleted) most recent date the cluster was u...

#define MEMBER_PTR(MemberName)

#define SET_ENUM_INTERNAL_NAME(OwnerName, MemberName)

#define ADD_NAMED_MEMBER(MemberAlias, MemberName, TypeMacro, TypeMacroArgs)

#define ADD_NAMED_NULL_MEMBER(MemberAlias, TypeMacro, TypeMacroArgs)

#define ADD_NAMED_REF_MEMBER(MemberAlias, MemberName, ClassName)

#define SET_ENUM_MODULE(ModuleName)

#define ADD_NAMED_STD_MEMBER(MemberAlias, MemberName)

#define SET_CLASS_MODULE(ModuleName)

#define ADD_NAMED_ENUM_MEMBER(MemberAlias, MemberName, EnumName)

#define ADD_ENUM_VALUE(EnumValueName, EnumValueValue)

#define SET_INTERNAL_NAME(OwnerName, MemberName)

bool IsAllocatedInPool(void) const THROWS_NONE

Check if object is allocated in memory pool (not system heap)

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

void ResetAttlist(void)

Reset Attlist data member.

list< string > m_SuspectEvidence

void ResetAssembly(void)

Reset Assembly data member.

void ResetAttlist(void)

Reset Attlist data member.

void ResetMergeHistory(void)

Reset MergeHistory data member.

void ResetDate(void)

Reset Date data member.

list< CRef< C_E_Phenotype > > m_Phenotype

void ResetTwoHit2AlleleBatchId(void)

Reset TwoHit2AlleleBatchId data member.

void ResetUpdate(void)

Reset Update data member.

void ResetSeq5(void)

Reset Seq5 data member.

void ResetSequence(void)

Reset Sequence data member.

void Reset(void)

Reset the whole object.

void Reset(void)

Reset the whole object.

THet & SetHet(void)

Assign a value to Het data member.

void Reset(void)

Reset the whole object.

void ResetAttlist(void)

Reset Attlist data member.

void Reset(void)

Reset the whole object.

void ResetRsStruct(void)

Reset RsStruct data member.

virtual void Reset(void)

Reset the whole object.

void ResetAttlist(void)

Reset Attlist data member.

void ResetFrequencyClass(void)

Reset FrequencyClass data member.

void Reset(void)

Reset the whole object.

void ResetAttlist(void)

Reset Attlist data member.

CRef< TAttlist > m_Attlist

void ResetSeq3(void)

Reset Seq3 data member.

TValidation & SetValidation(void)

Assign a value to Validation data member.

void Reset(void)

Reset the whole object.

void ResetTGPPhase(void)

Reset TGPPhase data member.

void ResetSuspectEvidence(void)

Reset SuspectEvidence data member.

list< CRef< CAssembly > > m_Assembly

void ResetAncestralAllele(void)

Reset AncestralAllele data member.

TAttlist & SetAttlist(void)

Assign a value to Attlist data member.

void Reset(void)

Reset the whole object.

TUpdate & SetUpdate(void)

Assign a value to Update data member.

CRef< TAttlist > m_Attlist

list< CRef< CRsStruct > > m_RsStruct

void ResetHet(void)

Reset Het data member.

CRef< TValidation > m_Validation

void Reset(void)

Reset the whole object.

void Reset(void)

Reset the whole object.

void ResetAllele(void)

Reset Allele data member.

void ResetValidation(void)

Reset Validation data member.

void ResetBitField(void)

Reset BitField data member.

CRef< TAttlist > m_Attlist

list< int > m_FrequencyClass

list< CRef< C_E_AlleleOrigin > > m_AlleleOrigin

void ResetAllele(void)

Reset Allele data member.

list< CRef< C_E_MergeHistory > > m_MergeHistory

void ResetFrequency(void)

Reset Frequency data member.

list< CRef< CPrimarySequence > > m_PrimarySequence

TAttlist & SetAttlist(void)

Assign a value to Attlist data member.

void ResetAttlist(void)

Reset Attlist data member.

void ResetDate(void)

Reset Date data member.

list< int > m_TwoHit2AlleleBatchId

void ResetHgvs(void)

Reset Hgvs data member.

EHet_attlist_type

Est=Estimated average het from allele frequencies, Obs=Observed from genotype data.

void ResetAttlist(void)

Reset Attlist data member.

void ResetAttlist(void)

Reset Attlist data member.

void ResetRsLinkout(void)

Reset RsLinkout data member.

TCreate & SetCreate(void)

Assign a value to Create data member.

CRef< TSequence > m_Sequence

CRef< TAttlist > m_Attlist

CRef< TAttlist > m_Attlist

void ResetPrimarySequence(void)

Reset PrimarySequence data member.

CRef< TAttlist > m_Attlist

void ResetAlleleOrigin(void)

Reset AlleleOrigin data member.

void Reset(void)

Reset the whole object.

void ResetBioSource(void)

Reset BioSource data member.

void ResetClinicalSignificance(void)

Reset ClinicalSignificance data member.

TAttlist & SetAttlist(void)

Assign a value to Attlist data member.

TAttlist & SetAttlist(void)

Assign a value to Attlist data member.

TSequence & SetSequence(void)

Assign a value to Sequence data member.

TAttlist & SetAttlist(void)

Assign a value to Attlist data member.

CRef< TAttlist > m_Attlist

void Reset(void)

Reset the whole object.

void Reset(void)

Reset the whole object.

void ResetHapMapPhase(void)

Reset HapMapPhase data member.

TAttlist & SetAttlist(void)

Assign a value to Attlist data member.

list< int > m_OtherPopBatchId

void Reset(void)

Reset the whole object.

void ResetMergeHistory(void)

Reset MergeHistory data member.

void ResetCreate(void)

Reset Create data member.

void ResetGenome(void)

Reset Genome data member.

list< int > m_HapMapPhase

void Reset(void)

Reset the whole object.

TAttlist & SetAttlist(void)

Assign a value to Attlist data member.

void ResetOtherPopBatchId(void)

Reset OtherPopBatchId data member.

void ResetSs(void)

Reset Ss data member.

void ResetOrigin(void)

Reset Origin data member.

void ResetObserved(void)

Reset Observed data member.

TAttlist & SetAttlist(void)

Assign a value to Attlist data member.

void Reset(void)

Reset the whole object.

list< CRef< CRsLinkout > > m_RsLinkout

void Reset(void)

Reset the whole object.

void Reset(void)

Reset the whole object.

void ResetPhenotype(void)

Reset Phenotype data member.

void Reset(void)

Reset the whole object.

void Reset(void)

Reset the whole object.

TAttlist & SetAttlist(void)

Assign a value to Attlist data member.

void ResetHet(void)

Reset Het data member.

list< CRef< C_E_BioSource > > m_BioSource

void ResetUpdate(void)

Reset Update data member.

void ResetCreate(void)

Reset Create data member.

void ResetFrequency(void)

Reset Frequency data member.

list< CRef< C_E_Frequency > > m_Frequency

void ResetAttlist(void)

Reset Attlist data member.

const GenericPointer< typename T::ValueType > T2 value

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