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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/Prot__ref___8hpp_source.html below:

NCBI C++ ToolKit: include/objects/seqfeat/Prot_ref_.hpp Source File

41 #ifndef OBJECTS_SEQFEAT_PROT_REF_BASE_HPP 42 #define OBJECTS_SEQFEAT_PROT_REF_BASE_HPP 54 #ifndef BEGIN_objects_SCOPE 55 # define BEGIN_objects_SCOPE BEGIN_SCOPE(objects) 56 # define END_objects_SCOPE END_SCOPE(objects) 96

eProcessed_not_set = 0,

97

eProcessed_preprotein = 1,

98

eProcessed_mature = 2,

99

eProcessed_signal_peptide = 3,

100

eProcessed_transit_peptide = 4,

101

eProcessed_propeptide = 5

110  typedef

list< string >

TEc

;

112  typedef

vector< CRef< CDbtag > >

TDb

;

138  bool

IsSetName(

void

)

const

;

145  bool

CanGetName(

void

)

const

;

148  void

ResetName(

void

);

154  const TName

& GetName(

void

)

const

;

160  TName

& SetName(

void

);

170  bool

IsSetDesc(

void

)

const

;

177  bool

CanGetDesc(

void

)

const

;

180  void

ResetDesc(

void

);

186  const TDesc

& GetDesc(

void

)

const

;

199  TDesc

& SetDesc(

void

);

209  bool

IsSetEc(

void

)

const

;

216  bool

CanGetEc(

void

)

const

;

219  void

ResetEc(

void

);

225  const TEc

& GetEc(

void

)

const

;

241  bool

IsSetActivity(

void

)

const

;

248  bool

CanGetActivity(

void

)

const

;

251  void

ResetActivity(

void

);

257  const TActivity

& GetActivity(

void

)

const

;

273  bool

IsSetDb(

void

)

const

;

280  bool

CanGetDb(

void

)

const

;

283  void

ResetDb(

void

);

289  const TDb

& GetDb(

void

)

const

;

304  bool

IsSetProcessed(

void

)

const

;

311  bool

CanGetProcessed(

void

)

const

;

314  void

ResetProcessed(

void

);

317  void

SetDefaultProcessed(

void

);

338  virtual void

Reset(

void

);

352

vector< CRef< CDbtag > >

m_Db

;

421  m_Desc

= std::forward<CProt_ref_Base::TDesc>(

value

);

*** Prot-ref *********************************************** * * Reference to a protein name *

Base class for all serializable objects.

static char UnassignedByte(void)

void ThrowUnassigned(TMemberIndex index) const

#define ENUM_METHOD_NAME(EnumName)

static string UnassignedString(void)

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_SEQFEAT_EXPORT

TActivity & SetActivity(void)

Assign a value to Activity data member.

DECLARE_INTERNAL_TYPE_INFO()

bool IsSetDesc(void) const

description (instead of name) Check if a value has been assigned to Desc data member.

const TDb & GetDb(void) const

Get the Db member data.

EProcessed

processing status

vector< CRef< CDbtag > > TDb

vector< CRef< CDbtag > > m_Db

CProt_ref_Base(const CProt_ref_Base &)

bool CanGetActivity(void) const

Check if it is safe to call GetActivity method.

const TActivity & GetActivity(void) const

Get the Activity member data.

list< string > m_Activity

bool CanGetProcessed(void) const

Check if it is safe to call GetProcessed method.

CProt_ref_Base & operator=(const CProt_ref_Base &)

void ResetProcessed(void)

Reset Processed data member.

TEc & SetEc(void)

Assign a value to Ec data member.

TProcessed & SetProcessed(void)

Assign a value to Processed data member.

TDesc & SetDesc(void)

Assign a value to Desc data member.

const TName & GetName(void) const

Get the Name member data.

bool IsSetDb(void) const

ids in other dbases Check if a value has been assigned to Db data member.

bool IsSetEc(void) const

E.C.

bool CanGetDb(void) const

Check if it is safe to call GetDb method.

TProcessed GetProcessed(void) const

Get the Processed member data.

bool IsSetProcessed(void) const

Check if a value has been assigned to Processed data member.

bool IsSetName(void) const

protein name Check if a value has been assigned to Name data member.

bool CanGetEc(void) const

Check if it is safe to call GetEc method.

Tparent::CMemberIndex< E_memberIndex, 7 > TmemberIndex

bool CanGetName(void) const

Check if it is safe to call GetName method.

void SetDefaultProcessed(void)

Assign default value to Processed data member.

const TDesc & GetDesc(void) const

Get the Desc member data.

bool IsSetActivity(void) const

activities Check if a value has been assigned to Activity data member.

const TEc & GetEc(void) const

Get the Ec member data.

TDb & SetDb(void)

Assign a value to Db data member.

bool CanGetDesc(void) const

Check if it is safe to call GetDesc method.

TName & SetName(void)

Assign a value to Name data member.

const GenericPointer< typename T::ValueType > T2 value


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