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NCBI C++ ToolKit: include/objects/seqloc/Packed_seqpnt.hpp Source File

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AddPoints(

& points);

FlipStrand(

);

x_IsMinusStrand(

)

;

(points.begin(), points.end(), back_inserter(

()));

(points.begin(), points.end(), back_inserter(

()));

ESeqLocExtremes

Used to determine the meaning of a location's Start/Stop positions.

CPacked_seqpnt & operator=(const CPacked_seqpnt &value)

CPacked_seqpnt(const CPacked_seqpnt &value)

void AddPoint(TSeqPos point)

void AddPoints(const TPoints &points)

CPacked_seqpnt_Base Tparent

unsigned int TSeqPos

Type for sequence locations and lengths.

TSeqPos GetStop(const CSeq_loc &loc, CScope *scope, ESeqLocExtremes ext=eExtreme_Positional)

If only one CBioseq is represented by CSeq_loc, returns the position at the stop of the location.

TSeqPos GetStart(const CSeq_loc &loc, CScope *scope, ESeqLocExtremes ext=eExtreme_Positional)

If only one CBioseq is represented by CSeq_loc, returns the position at the start of the location.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_SEQLOC_EXPORT

ENa_strand

strand of nucleic acid

TId & SetId(void)

Assign a value to Id data member.

TStrand & SetStrand(void)

Assign a value to Strand data member.

TPoints & SetPoints(void)

Assign a value to Points data member.

vector< TSeqPos > TPoints

const GenericPointer< typename T::ValueType > T2 value

void copy(Njn::Matrix< S > *matrix_, const Njn::Matrix< T > &matrix0_)

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