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NCBI C++ ToolKit: include/objects/seqloc/PDB_seq_id.hpp Source File

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37 #ifndef OBJECTS_SEQLOC_PDB_SEQ_ID_HPP 38 #define OBJECTS_SEQLOC_PDB_SEQ_ID_HPP 64

ostream& AsFastaString(ostream& s)

const

;

68  void

ResetChainIdentifiers(

void

);

71  void

SetChainIdentifiers(

TChain

chainIdentifier);

79  void

SetChainIdentifiers(

const TChain_id

& chainIdentifier);

96  string

GetEffectiveChain_id(EBothUnsetPriority bothUnsetPriority = eBothUnset_ChainId)

const

;

112  bool

IsChainConflict(EConflictMode encodingMode = eConflictMode_default)

const

;

CPDB_seq_id(const CPDB_seq_id &)

sequence::ECompare Compare(const CSeq_loc &loc1, const CSeq_loc &loc2, CScope *scope)

Returns the sequence::ECompare containment relationship between CSeq_locs.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_SEQLOC_EXPORT

CPDB_seq_id_Base & operator=(const CPDB_seq_id_Base &)

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