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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/PDB__seq__id_8cpp_source.html below:

NCBI C++ ToolKit: src/objects/seqloc/PDB_seq_id.cpp Source File

72  if

(

id

.IsSetChain_id() ) {

73  return id

.GetChain_id();

75  if

(

id

.IsSetChain() ) {

76  return string

(1,

char

(

id

.GetChain()));

104

}

else if

( chain ==

'\0'

) {

107  return

s <<

GetMol

().

Get

() <<

'|'

<< chain;

131  string

chain(1, chainChar);

145  string

chainUpperDoubled = chain + chain;

168  if

(chain_id.

empty

() && chainIdentifier.length() == 1 ) {

173  if

(chainIdentifier.empty() || chain_id.

empty

()) {

176  else if

(chain_id.

length

() == 1) {

177  SetChain

(

static_cast<unsigned char>

(chain_id[0]) );

188  string

s(1, (

char

) chain);

User-defined methods of the data storage class.

static string s_GetEffectiveChain_id(const CPDB_seq_id &id)

bool IsChainConflict(EConflictMode encodingMode=eConflictMode_default) const

int Compare(const CPDB_seq_id &psip2) const

void SetChainIdentifiers(TChain chainIdentifier)

void ResetChainIdentifiers(void)

bool Match(const CPDB_seq_id &psip2) const

ostream & AsFastaString(ostream &s) const

string GetEffectiveChain_id(EBothUnsetPriority bothUnsetPriority=eBothUnset_ChainId) const

CTempString implements a light-weight string on top of a storage buffer whose lifetime management is ...

const TPrim & Get(void) const

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

PCase_Generic< string > PCase

static CTempString TruncateSpaces_Unsafe(const CTempString str, ETrunc where=eTrunc_Both)

Truncate whitespace in a string.

PNocase_Generic< string > PNocase

bool empty(void) const

Return true if the represented string is empty (i.e., the length is zero)

size_type length(void) const

Return the length of the represented array.

static string & ToUpper(string &str)

Convert string to upper case – string& version.

@ eTrunc_Both

Truncate whitespace at both begin and end of string.

TChain GetChain(void) const

Get the Chain member data.

bool IsSetChain_id(void) const

chain identifier; length-independent generalization of 'chain' Check if a value has been assigned to ...

bool IsSetChain(void) const

Deprecated: 'chain' can't support multiple character PDB chain identifiers (introduced in 2015).

TChain_id & SetChain_id(void)

Assign a value to Chain_id data member.

TChain & SetChain(void)

Assign a value to Chain data member.

void ResetChain_id(void)

Reset Chain_id data member.

const TMol & GetMol(void) const

Get the Mol member data.

const TChain_id & GetChain_id(void) const

Get the Chain_id member data.

void ResetChain(void)

Reset Chain data member.

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