A RetroSearch Logo

Home - News ( United States | United Kingdom | Italy | Germany ) - Football scores

Search Query:

Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/OrgMod_8hpp_source.html below:

NCBI C++ ToolKit: include/objects/seqfeat/OrgMod.hpp Source File

Go to the documentation of this file.

Go to the SVN repository for this file.

39 #ifndef OBJECTS_SEQFEAT_ORGMOD_HPP 40 #define OBJECTS_SEQFEAT_ORGMOD_HPP 71  static

TSubtype GetSubtypeValue(

const string

&

str

,

72

EVocabulary vocabulary = eVocabulary_raw);

74

EVocabulary vocabulary = eVocabulary_raw);

77  static bool

IsValidSubtypeName(

const string

&

str

,

78

EVocabulary vocabulary = eVocabulary_raw);

80  static bool

IsDiscouraged(

const

TSubtype stype,

bool

indexer=

false

);

81  static bool

IsMultipleValuesAllowed(TSubtype);

85  static bool

HoldsInstitutionCode(

const

TSubtype stype);

87  static bool

ParseStructuredVoucher(

const string

&

str

,

string

& inst,

string

& coll,

string

&

id

);

89  static bool

IsInstitutionCodeValid(

const string

& inst_coll,

string

&voucher_type,

bool

& is_miscapitalized,

string

& correct_cap,

bool

& needs_country,

bool

& erroneous_country);

90  static string

IsCultureCollectionValid(

const string

& culture_collection);

91  static string

IsSpecimenVoucherValid(

const string

& specimen_voucher);

92  static string

IsBiomaterialValid(

const string

& biomaterial);

93  static string

IsStructuredVoucherValid(

const string

&

val

,

const string

& voucher_type);

94  static string

MakeStructuredVoucher(

const string

& inst,

const string

& coll,

const string

&

id

);

95  static bool

FixStructuredVoucher(

string

&

val

,

const string

& voucher_type);

96  static bool

AddStructureToVoucher(

string

&

val

,

const string

& voucher_type);

97  static bool

RescueInstFromParentheses(

string

&

val

,

const string

& voucher_type);

98  static string

CheckMultipleVouchers(

const

vector<string>&);

102  static const string

&GetInstitutionFullName(

const string

&short_name );

103  static const string

&GetInstitutionShortName(

const string

&full_name );

105  static string

FixStrain(

const string

& strain);

106  static bool

FuzzyStrainMatch(

const string

& strain1,

const string

& strain2 );

107  static bool

IsStrainValid(

const string

& strain);

108  static bool

IsIsolateValid(

const string

& isolate);

110  static string

FixHost(

const string

&

value

);

111  static string

FixHostCapitalization(

const string

&

value

);

115  static string

AutoFix(TSubtype subtype,

const string

&

value

);

118  static bool

IsDeprecated(TSubtype subtype);

119  bool

IsDeprecated()

const

;

124  bool

RemoveAbbreviation();

130  static bool

IsValidTypeMaterial(

const string

& type_material);

133  static bool

IsINSDCValidTypeMaterial(

const string

& type_material);

138  static bool

NCBI_ValidateForMultipleIsolates(

void

);

146  bool

& is_miscapitalized,

string

& correct_cap,

bool

& needs_country,

bool

& erroneous_country);

static string GetSubtypeName(const CSubSource &qual)

@OrgMod.hpp User-defined methods of the data storage class.

COrgMod(const COrgMod &value)

map< string, string, PNocase > TInstitutionCodeMap

static TSubtype GetSubtypeValue(const string &str, EVocabulary vocabulary=eVocabulary_raw)

COrgMod & operator=(const COrgMod &value)

container_type::iterator iterator

static const char * str(char *buf, int n)

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_SEQFEAT_EXPORT

TSubname & SetSubname(void)

Assign a value to Subname data member.

TSubtype & SetSubtype(void)

Assign a value to Subtype data member.

const GenericPointer< typename T::ValueType > T2 value

static bool FixCapitalization(string &name, bool apostroph)

static bool IsUnexpectedViralOrgModQualifier(COrgMod::TSubtype subtype)

RetroSearch is an open source project built by @garambo | Open a GitHub Issue

Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo

HTML: 3.2 | Encoding: UTF-8 | Version: 0.7.4