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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/Na__strand_8hpp_source.html below:

NCBI C++ ToolKit: include/objects/seqloc/Na_strand.hpp Source File

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37 #ifndef OBJECTS_SEQLOC_NA_STRAND_HPP 38 #define OBJECTS_SEQLOC_NA_STRAND_HPP

bool IsForward(ENa_strand s)

bool IsReverse(ENa_strand s)

ENa_strand Reverse(ENa_strand s)

ESeqLocExtremes

Used to determine the meaning of a location's Start/Stop positions.

@ eExtreme_Positional

numerical value

@ eExtreme_Biological

5' and 3'

EIsSetStrand

Flag used by IsSetStrand() to switch between any/all modes.

@ eIsSetStrand_All

Check if all parts have strand.

@ eIsSetStrand_Any

Check if any part has strand.

bool SameOrientation(ENa_strand a, ENa_strand b)

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

ENa_strand

strand of nucleic acid

@ eNa_strand_both_rev

in reverse orientation

@ eNa_strand_both

in forward orientation


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